miRNEST 2.0, an integrative microRNA resource :: BLAST
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgccatggatg 33
|||||||||||||||||||||||||||||
Sbjct: 10 taagctcaggagggatagcgccatggatg 38
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 92 tatagcgctatccatcctgagtttcat 118
|||||||||||||||||||||||||||
Sbjct: 83 tatagcgctatccatcctgagtttcat 109
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgccatggatg 33
|||||||||||||||||||||||||||||
Sbjct: 17 taagctcaggagggatagcgccatggatg 45
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 92 tatagcgctatccatcctgagtttcat 118
|||||||||||||||||||||||||||
Sbjct: 90 tatagcgctatccatcctgagtttcat 116
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgccatggatg 33
|||||||||||||||||||||||||||||
Sbjct: 14 taagctcaggagggatagcgccatggatg 42
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 92 tatagcgctatccatcctgagtttcat 118
|||||||||||||||||||||||||||
Sbjct: 87 tatagcgctatccatcctgagtttcat 113
>40468_gma-MIR390a:mirbase
Length = 105
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccatggatg 33
||||||||||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgccatggatg 38
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 87 tcttctatagcgctatccatcctgagtttcat 118
|||||| | |||||||||||||||||||||||
Sbjct: 58 tcttctcttgcgctatccatcctgagtttcat 89
>40467_gma-MIR390a:mirbase
Length = 105
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccatggatg 33
||||||||||||||||||||||||||||
Sbjct: 11 aagctcaggagggatagcgccatggatg 38
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 87 tcttctatagcgctatccatcctgagtttcat 118
|||||| | |||||||||||||||||||||||
Sbjct: 58 tcttctcttgcgctatccatcctgagtttcat 89
>41237_csi-MIR390:mirbase
Length = 154
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgccatgg 30
||||||||||||||||||||||||||
Sbjct: 20 taagctcaggagggatagcgccatgg 45
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 96 gcgctatccatcctgagtttcat 118
|||||||||||||||||||||||
Sbjct: 98 gcgctatccatcctgagtttcat 120
>40072_ath-MIR390a:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 96 gcgctatccatcctgagtttcattgg 121
||||||||||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagtttcattgg 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccatg 29
||||||||||||||||||||||||
Sbjct: 18 aagctcaggagggatagcgccatg 41
>39862_aly-MIR390a:mirbase
Length = 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 96 gcgctatccatcctgagtttcattgg 121
||||||||||||||||||||||||||
Sbjct: 80 gcgctatccatcctgagtttcattgg 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccatg 29
||||||||||||||||||||||||
Sbjct: 29 aagctcaggagggatagcgccatg 52
>41640_vvi-MIR390:mirbase
Length = 140
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgccatg 29
|||||||||||||||||||||||||
Sbjct: 10 taagctcaggagggatagcgccatg 34
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgccatg 29
|||||||||||||||||||||||||
Sbjct: 10 taagctcaggagggatagcgccatg 34
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 96 gcgctatccatcctgagtttcattg 120
|||||||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagtttcattg 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgcc 26
||||||||||||||||||||||
Sbjct: 10 taagctcaggagggatagcgcc 31
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgccatg 29
|||||||||||||||||||||||||
Sbjct: 10 taagctcaggagggatagcgccatg 34
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgccatggatg 33
|||||||||||||||||||||||| ||||
Sbjct: 20 taagctcaggagggatagcgccattgatg 48
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 94 tagcgctatccatcctgagtttcat 118
|||||||||||||||||||||||||
Sbjct: 86 tagcgctatccatcctgagtttcat 110
>40073_ath-MIR390b:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccatgg 30
|||||||||||||||||||||||||
Sbjct: 15 aagctcaggagggatagcgccatgg 39
>40705_mtr-MIR390:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgccat 28
||||||||||||||||||||||||
Sbjct: 5 taagctcaggagggatagcgccat 28
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 87 tcttctatagcgctatccatcctgagtttcat 118
|||||| | |||||||||||||||||||||||
Sbjct: 67 tcttctcttgcgctatccatcctgagtttcat 98
>40294_bna-MIR390c:mirbase
Length = 128
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccatg 29
||||||||||||||||||||||||
Sbjct: 23 aagctcaggagggatagcgccatg 46
>40292_bna-MIR390a:mirbase
Length = 144
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccatg 29
||||||||||||||||||||||||
Sbjct: 33 aagctcaggagggatagcgccatg 56
>39863_aly-MIR390b:mirbase
Length = 127
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccatg 29
||||||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgccatg 42
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccat 28
|||||||||||||||||||||||
Sbjct: 21 aagctcaggagggatagcgccat 43
>40293_bna-MIR390b:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccat 28
|||||||||||||||||||||||
Sbjct: 18 aagctcaggagggatagcgccat 40
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 96 gcgctatccatcctgagtttcattgg 121
||||| ||||||||||||||||||||
Sbjct: 67 gcgctgtccatcctgagtttcattgg 92
>39485_ppt-MIR390a:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgccat 28
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgcc 26
||||||||||||||||||||||
Sbjct: 10 taagctcaggagggatagcgcc 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 96 gcgctatccatcctgagttt 115
||||||||||||||||||||
Sbjct: 79 gcgctatccatcctgagttt 98
>40371_rco-MIR390a:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 5 taagctcaggagggatagcgcc 26
||||||||||||||||||||||
Sbjct: 5 taagctcaggagggatagcgcc 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 96 gcgctatccatcctgagtttca 117
||||||||||||||||||||||
Sbjct: 82 gcgctatccatcctgagtttca 103
>42785_zma-MIR390b:mirbase
Length = 192
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42784_zma-MIR390a:mirbase
Length = 181
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42565_sbi-MIR390:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 3 aagctcaggagggatagcgcc 23
>41996_osa-MIR390:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41773_bdi-MIR390b:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41772_bdi-MIR390:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 31 aagctcaggagggatagcgcc 51
>39486_ppt-MIR390b:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 aagctcaggagggatagcgcc 26
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>39487_ppt-MIR390c:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 7 agctcaggagggatagcgcc 26
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
