miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40092_ath-MIR399a:mirbase
          Length = 123

 Score = 44.1 bits (22), Expect = 2e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 57  ttatctgccaaaggagatttgc 78
           ||||||||||||||||||||||
Sbjct: 88  ttatctgccaaaggagatttgc 109




>42047_osa-MIR399g:mirbase
          Length = 119

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 58  tatctgccaaaggagatttgc 78
           |||||||||||||||||||||
Sbjct: 85  tatctgccaaaggagatttgc 105




>41671_vvi-MIR399d:mirbase
          Length = 105

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 60 tctgccaaaggagatttgctc 80
          |||||||||||||||||||||
Sbjct: 73 tctgccaaaggagatttgctc 93




>41458_ptc-MIR399k:mirbase
          Length = 94

 Score = 42.1 bits (21), Expect = 6e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 62 tgccaaaggagatttgctcac 82
          |||||||||||||||||||||
Sbjct: 66 tgccaaaggagatttgctcac 86



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 58 tatctgccaaaggagatttgctca 81
          |||||||||||||| |||||||||
Sbjct: 34 tatctgccaaaggaaatttgctca 11




>40736_mtr-MIR399f:mirbase
          Length = 104

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 atctgccaaaggagatttgc 78
          ||||||||||||||||||||
Sbjct: 76 atctgccaaaggagatttgc 95




>40735_mtr-MIR399e:mirbase
          Length = 134

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  atctgccaaaggagatttgc 78
           ||||||||||||||||||||
Sbjct: 92  atctgccaaaggagatttgc 111




>40731_mtr-MIR399a:mirbase
          Length = 134

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 59  atctgccaaaggagatttgc 78
           ||||||||||||||||||||
Sbjct: 92  atctgccaaaggagatttgc 111




>42594_sbi-MIR399f:mirbase
          Length = 120

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 60 tctgccaaaggagatttgc 78
          |||||||||||||||||||
Sbjct: 79 tctgccaaaggagatttgc 97




>42046_osa-MIR399f:mirbase
          Length = 117

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tctgccaaaggagatttgc 78
           |||||||||||||||||||
Sbjct: 85  tctgccaaaggagatttgc 103




>41672_vvi-MIR399e:mirbase
          Length = 112

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 60 tctgccaaaggagatttgc 78
          |||||||||||||||||||
Sbjct: 80 tctgccaaaggagatttgc 98




>41246_csi-MIR399a:mirbase
          Length = 155

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tctgccaaaggagatttgc 78
           |||||||||||||||||||
Sbjct: 112 tctgccaaaggagatttgc 130




>41192_aqc-MIR399:mirbase
          Length = 98

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 56 attatctgccaaaggagatttgc 78
          |||||||||||||||||| ||||
Sbjct: 66 attatctgccaaaggagagttgc 88




>41149_tcc-MIR399d:mirbase
          Length = 136

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tctgccaaaggagatttgc 78
           |||||||||||||||||||
Sbjct: 94  tctgccaaaggagatttgc 112




>41147_tcc-MIR399b:mirbase
          Length = 135

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tctgccaaaggagatttgc 78
           |||||||||||||||||||
Sbjct: 93  tctgccaaaggagatttgc 111




>40387_rco-MIR399e:mirbase
          Length = 108

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 60 tctgccaaaggagatttgc 78
          |||||||||||||||||||
Sbjct: 81 tctgccaaaggagatttgc 99




>40299_bna-MIR399:mirbase
          Length = 102

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 60 tctgccaaaggagatttgc 78
          |||||||||||||||||||
Sbjct: 79 tctgccaaaggagatttgc 97




>40097_ath-MIR399f:mirbase
          Length = 118

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tctgccaaaggagatttgc 78
           |||||||||||||||||||
Sbjct: 86  tctgccaaaggagatttgc 104




>40096_ath-MIR399e:mirbase
          Length = 109

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 60 tctgccaaaggagatttgc 78
          |||||||||||||||||||
Sbjct: 77 tctgccaaaggagatttgc 95




>40095_ath-MIR399d:mirbase
          Length = 100

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 60 tctgccaaaggagatttgc 78
          |||||||||||||||||||
Sbjct: 68 tctgccaaaggagatttgc 86




>39889_aly-MIR399f:mirbase
          Length = 167

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tctgccaaaggagatttgc 78
           |||||||||||||||||||
Sbjct: 110 tctgccaaaggagatttgc 128




>39888_aly-MIR399e:mirbase
          Length = 191

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tctgccaaaggagatttgc 78
           |||||||||||||||||||
Sbjct: 116 tctgccaaaggagatttgc 134




>39887_aly-MIR399d:mirbase
          Length = 135

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tctgccaaaggagatttgc 78
           |||||||||||||||||||
Sbjct: 82  tctgccaaaggagatttgc 100




>39884_aly-MIR399a:mirbase
          Length = 162

 Score = 38.2 bits (19), Expect = 0.001
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 60  tctgccaaaggagatttgc 78
           |||||||||||||||||||
Sbjct: 111 tctgccaaaggagatttgc 129