miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 95.6 bits (48), Expect = 5e-21
Identities = 79/88 (89%), Gaps = 1/88 (1%)
Strand = Plus / Plus
Query: 2 aagactgggaacaggcagtgcatggatggggctactaacagaaaacatctgttttggctc 61
||||| |||||||||||| |||||||||| ||||||||||||| | |||||||||||
Sbjct: 12 aagacggggaacaggcagagcatggatggagctactaacagaagtact-tgttttggctc 70
Query: 62 tacccctgcactgcctcttccctggctt 89
||||| ||||||||||||||||||||||
Sbjct: 71 tacccatgcactgcctcttccctggctt 98
>40108_ath-MIR408:mirbase
Length = 218
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 49 tctgttttggctctacccctgcactgcctcttccctggct 88
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 102 tctgttttgtctctacccatgcactgcctcttccctggct 141
>39897_aly-MIR408:mirbase
Length = 211
Score = 63.9 bits (32), Expect = 2e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 49 tctgttttggctctacccctgcactgcctcttccctggct 88
||||||||| |||||||| |||||||||||||||||||||
Sbjct: 99 tctgttttgtctctacccatgcactgcctcttccctggct 138
>41683_vvi-MIR408:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 7e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 50 ctgttttggctctacccctgcactgcctcttccctggct 88
||||||| ||||||||| |||||||||||||||||||||
Sbjct: 60 ctgtttttgctctacccatgcactgcctcttccctggct 98
>41252_csi-MIR408:mirbase
Length = 153
Score = 56.0 bits (28), Expect = 4e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 49 tctgttttggctctacccctgcactgcctcttccctggct 88
||||||||||||| ||| |||||||||||||||||||||
Sbjct: 102 tctgttttggctcctcccatgcactgcctcttccctggct 141
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 acccctgcactgcctcttccctggct 88
||||||||||||||||||||||||||
Sbjct: 154 acccctgcactgcctcttccctggct 179
>42465_sof-MIR408d:mirbase
Length = 215
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 63 acccctgcactgcctcttccctggct 88
||||||||||||||||||||||||||
Sbjct: 172 acccctgcactgcctcttccctggct 197
>42830_zma-MIR408b:mirbase
Length = 147
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 cccctgcactgcctcttccctggct 88
|||||||||||||||||||||||||
Sbjct: 122 cccctgcactgcctcttccctggct 146
>42829_zma-MIR408:mirbase
Length = 191
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 cccctgcactgcctcttccctggct 88
|||||||||||||||||||||||||
Sbjct: 149 cccctgcactgcctcttccctggct 173
>42600_sbi-MIR408:mirbase
Length = 205
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 cccctgcactgcctcttccctggct 88
|||||||||||||||||||||||||
Sbjct: 181 cccctgcactgcctcttccctggct 205
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 cccctgcactgcctcttccctggct 88
|||||||||||||||||||||||||
Sbjct: 223 cccctgcactgcctcttccctggct 247
>42464_sof-MIR408c:mirbase
Length = 286
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 cccctgcactgcctcttccctggct 88
|||||||||||||||||||||||||
Sbjct: 244 cccctgcactgcctcttccctggct 268
>42463_sof-MIR408b:mirbase
Length = 286
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 cccctgcactgcctcttccctggct 88
|||||||||||||||||||||||||
Sbjct: 244 cccctgcactgcctcttccctggct 268
>42462_sof-MIR408a:mirbase
Length = 283
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 cccctgcactgcctcttccctggct 88
|||||||||||||||||||||||||
Sbjct: 241 cccctgcactgcctcttccctggct 265
>42052_osa-MIR408:mirbase
Length = 213
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 64 cccctgcactgcctcttccctggct 88
|||||||||||||||||||||||||
Sbjct: 150 cccctgcactgcctcttccctggct 174
>42647_tae-MIR408:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 65 ccctgcactgcctcttccctggct 88
||||||||||||||||||||||||
Sbjct: 134 ccctgcactgcctcttccctggct 157
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggcttcc 91
||||||||||||||||||||||||
Sbjct: 94 tgcactgcctcttccctggcttcc 117
>41193_aqc-MIR408:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 68 tgcactgcctcttccctggct 88
|||||||||||||||||||||
Sbjct: 21 tgcactgcctcttccctggct 1
>40405_ahy-MIR408:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggct 88
|||||||||||||||||||||
Sbjct: 82 tgcactgcctcttccctggct 102
>40404_ahy-MIR408:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggct 88
|||||||||||||||||||||
Sbjct: 82 tgcactgcctcttccctggct 102
>39742_smo-MIR408:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggct 88
|||||||||||||||||||||
Sbjct: 77 tgcactgcctcttccctggct 97
>39428_pta-MIR408:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggct 88
|||||||||||||||||||||
Sbjct: 65 tgcactgcctcttccctggct 85
>42466_sof-MIR408e:mirbase
Length = 283
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 65 ccctgcactgcctcttccctggct 88
|||||||||| |||||||||||||
Sbjct: 242 ccctgcactgactcttccctggct 265
