miRNEST 2.0, an integrative microRNA resource :: BLAST
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 230 bits (116), Expect = 2e-61
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 1 gaagagattataaatgttgacagaagagagagagcacaacccgagaaatggtcaaagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gaagagattataaatgttgacagaagagagagagcacaacccgagaaatggtcaaagaat 64
Query: 61 cttttacctttgttgggagtgtgctctctactcttctgtcatcatctttatcttta 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cttttacctttgttgggagtgtgctctctactcttctgtcatcatctttatcttta 120
>40334_rco-MIR156e:mirbase
Length = 95
Score = 91.7 bits (46), Expect = 1e-19
Identities = 83/94 (88%), Gaps = 1/94 (1%)
Strand = Plus / Plus
Query: 13 aatgttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttg 72
||||||||||||||||||||||||||||||| | || ||||| ||||| ||||||
Sbjct: 1 aatgttgacagaagagagagagcacaacccggcattaggctaaagagtctttg-cctttg 59
Query: 73 ttgggagtgtgctctctactcttctgtcatcatc 106
||||||||||||||||| ||||||||||||||||
Sbjct: 60 ttgggagtgtgctctctcctcttctgtcatcatc 93
>40430_gma-MIR156f:mirbase
Length = 106
Score = 89.7 bits (45), Expect = 4e-19
Identities = 82/93 (88%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 14 atgttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgt 73
|||||||||||||||||||||||||||||| | |||||| |||| | ||| |||||||
Sbjct: 8 atgttgacagaagagagagagcacaacccg-ggaatggttaaaggagtctttgcctttgt 66
Query: 74 tgggagtgtgctctctactcttctgtcatcatc 106
|||||||||||||||| || ||||||||||||
Sbjct: 67 tgggagtgtgctctctcttcctctgtcatcatc 99
>40426_gma-MIR156b:mirbase
Length = 120
Score = 73.8 bits (37), Expect = 3e-14
Identities = 80/93 (86%), Gaps = 1/93 (1%)
Strand = Plus / Plus
Query: 14 atgttgacagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgt 73
|||||||||||||||||||||||||||||| | ||||| |||| | ||| |||||||
Sbjct: 17 atgttgacagaagagagagagcacaacccg-ggaatggctaaaggagtctttgcctttgt 75
Query: 74 tgggagtgtgctctctactcttctgtcatcatc 106
||||||||||| |||| || ||||||||||||
Sbjct: 76 tgggagtgtgccctctcttcctctgtcatcatc 108
>41204_aqc-MIR529:mirbase
Length = 125
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 69 tttgttgggagtgtgctctctactcttctgtcatcatc 106
||||||||||||||||||| | ||||||||||||||||
Sbjct: 69 tttgttgggagtgtgctctttgctcttctgtcatcatc 106
>41080_tcc-MIR156a:mirbase
Length = 124
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 14 atgttgacagaagagagagagcacaacccg 43
||||||||||||||||||||||||||||||
Sbjct: 17 atgttgacagaagagagagagcacaacccg 46
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 69 tttgttgggagtgtgctctctactcttctgtcatcatc 106
||||||||||||||||| ||| |||||||||| ||||
Sbjct: 72 tttgttgggagtgtgctttctcttcttctgtcaccatc 109
>41914_osa-MIR156k:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 18 tgacagaagagagagagcacaacccg 43
||||||||||||||||||||||||||
Sbjct: 11 tgacagaagagagagagcacaacccg 36
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 9e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 73 ttgggagtgtgctctctactcttctgtcatcatc 106
||||||||||||||||| |||||||||||||||
Sbjct: 64 ttgggagtgtgctctctcttcttctgtcatcatc 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 atgttgacagaagagagagagcacaaccc 42
||||||||||||||||| |||||||||||
Sbjct: 7 atgttgacagaagagagggagcacaaccc 35
>40009_ath-MIR156h:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 aaatgttgacagaagagagagagcacaacc 41
|||||||||||||||| |||||||||||||
Sbjct: 6 aaatgttgacagaagaaagagagcacaacc 35
>39797_aly-MIR156h:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 aaatgttgacagaagagagagagcacaacc 41
|||||||||||||||| |||||||||||||
Sbjct: 2 aaatgttgacagaagaaagagagcacaacc 31
>42687_zma-MIR156j:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 tgacagaagagagagagcacaaccc 42
|||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 tgacagaagagagagagcacaaccc 42
|||||||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcacaaccc 45
>41867_far-MIR156b:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 gttgacagaagagagagagcaca 38
|||||||||||||||||||||||
Sbjct: 52 gttgacagaagagagagagcaca 74
>41866_far-MIR156a:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 gttgacagaagagagagagcaca 38
|||||||||||||||||||||||
Sbjct: 52 gttgacagaagagagagagcaca 74
>41726_bdi-MIR156:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 gttgacagaagagagagagcaca 38
|||||||||||||||||||||||
Sbjct: 99 gttgacagaagagagagagcaca 121
>40429_gma-MIR156e:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 tgtgctctctactcttctgtcatcatc 106
||||||||||| |||||||||||||||
Sbjct: 83 tgtgctctctagtcttctgtcatcatc 109
>40427_gma-MIR156c:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcacaacc 41
||||||||||||| |||||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaacc 170
>40336_rco-MIR156g:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 80 tgtgctctctactcttctgtcatcatc 106
||||||||||| |||||||||||||||
Sbjct: 68 tgtgctctctagtcttctgtcatcatc 94
>41877_far-MIR529:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 ttgacagaagagagagagcaca 38
||||||||||||||||||||||
Sbjct: 47 ttgacagaagagagagagcaca 68
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcacaac 40
||||||||||||| ||||||||||||
Sbjct: 9 tgttgacagaagatagagagcacaac 34
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcacaac 40
||||||||||||| ||||||||||||
Sbjct: 19 tgttgacagaagatagagagcacaac 44
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 tgtgctctctactcttctgtcatcatcttt 109
||||||||||| ||||||||||||| ||||
Sbjct: 79 tgtgctctctattcttctgtcatcaccttt 108
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>40335_rco-MIR156f:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcacaac 40
||||||||||||| ||||||||||||
Sbjct: 4 tgttgacagaagatagagagcacaac 29
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 80 tgtgctctctactcttctgtcatca 104
||||||||||| |||||||||||||
Sbjct: 69 tgtgctctctattcttctgtcatca 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41298_ptc-MIR156k:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 18 tgacagaagagagagagcacaaccc 42
||||||||||||| |||||||||||
Sbjct: 11 tgacagaagagagggagcacaaccc 35
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 80 tgtgctctctactcttctgtcatca 104
||||||||||| |||||||||||||
Sbjct: 73 tgtgctctctagtcttctgtcatca 97
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 80 tgtgctctctactcttctgtcatca 104
||||||||||| |||||||||||||
Sbjct: 73 tgtgctctctagtcttctgtcatca 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>40648_mtr-MIR156:mirbase
Length = 460
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 tgacagaagagagagagcaca 38
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcacaa 39
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcacaa 39
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>41913_osa-MIR156j:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
|||||||||||||||| |||||||
Sbjct: 39 tgttgacagaagagagtgagcaca 62
>41911_osa-MIR156h:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
|||||||||||||||| |||||||
Sbjct: 6 tgttgacagaagagagtgagcaca 29
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41077_gra-MIR157b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>41076_gra-MIR157a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40431_gma-MIR156g:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 22 tgttgacagaagatagagagcaca 45
>40428_gma-MIR156d:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>40337_rco-MIR156h:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40011_ath-MIR157b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40
>40010_ath-MIR157a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39799_aly-MIR157b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39798_aly-MIR157a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 15 tgttgacagaagagagagagcaca 38
||||||||||||| ||||||||||
Sbjct: 14 tgttgacagaagatagagagcaca 37
>39727_smo-MIR156b:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 81 gtgctctctactcttctgtcatca 104
|||||||||| |||||||||||||
Sbjct: 80 gtgctctctattcttctgtcatca 103
>39506_ppt-MIR529d:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 cagaagagagagagcacaacccga 44
|||||||||||||||||| |||||
Sbjct: 36 cagaagagagagagcacagcccga 59
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgacagaagagagagagcacaacc 41
|||||||||| |||||||||||||
Sbjct: 3 tgacagaagatagagagcacaacc 26
