miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 109 bits (55), Expect = 8e-25
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
|||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||
Sbjct: 2 agtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctat 61
Query: 61 ggatcccacag 71
|||||||||||
Sbjct: 62 ggatcccacag 72
Score = 60.0 bits (30), Expect = 7e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 127 ggagcttcattacctttccacagatccttatttggattgaagggagctctacat 180
|||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 125 ggagcttcattaccttgtattagatccttgtttggattgaagggagctctacat 178
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 99.6 bits (50), Expect = 8e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
|||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||
Sbjct: 9 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68
Query: 61 ggatcc 66
||||||
Sbjct: 69 ggatcc 74
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 148 agatccttatttggattgaagggagctcta 177
|||||| | |||||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 99.6 bits (50), Expect = 8e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
|||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||
Sbjct: 9 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68
Query: 61 ggatcc 66
||||||
Sbjct: 69 ggatcc 74
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 148 agatccttatttggattgaagggagctcta 177
|||||| | |||||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctcta 174
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 95.6 bits (48), Expect = 1e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 2 gtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatg 61
||||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 62 gatcccacagtactacccat 81
||||||||||| ||||||||
Sbjct: 61 gatcccacagttctacccat 80
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 150 atccttatttggattgaagggagctctac 178
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 95.6 bits (48), Expect = 1e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 2 gtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatg 61
||||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 62 gatcccacagtactacccat 81
||||||||||| ||||||||
Sbjct: 61 gatcccacagttctacccat 80
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 150 atccttatttggattgaagggagctctac 178
|||||| ||||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctctac 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 93.7 bits (47), Expect = 5e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
|||||||||||||||||||||| |||||||||| |||||||||||||||||| | |||
Sbjct: 7 agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 66
Query: 61 ggatcccacag 71
|||||||||||
Sbjct: 67 ggatcccacag 77
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 148 agatccttatttggattgaagggagctctaca 179
|||||||| |||||||||||||||||||||||
Sbjct: 151 agatccttgtttggattgaagggagctctaca 182
>40432_gma-MIR159a:mirbase
Length = 214
Score = 89.7 bits (45), Expect = 7e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
|||||||||||||||||||||| |||| |||| ||||| ||||||||||| ||||||
Sbjct: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
Query: 61 ggatcccacagtactacccat 81
|||||||||||| ||||||||
Sbjct: 79 ggatcccacagttctacccat 99
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 152 ccttatttggattgaagggagctctaca 179
|||| |||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctaca 197
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 77.8 bits (39), Expect = 3e-15
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
|||||||||||||||||||||| ||| | || || ||||||||| |||||||| ||||||
Sbjct: 9 agtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctat 68
Query: 61 ggatcccacag 71
| |||||||||
Sbjct: 69 gaatcccacag 79
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 148 agatccttatttggattgaagggagctcta 177
||||| || |||||||||||||||||||||
Sbjct: 149 agatctttttttggattgaagggagctcta 178
>41218_csi-MIR159:mirbase
Length = 216
Score = 73.8 bits (37), Expect = 4e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 agtggagctccttgaagtccaacagagggtcttggt-gggtagattgagctgctaagcta 59
|||||||||||||||||||||| ||||| ||| | ||||| ||||||||||| |||||
Sbjct: 10 agtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagcta 69
Query: 60 tggatcccacagt 72
|||||||||||||
Sbjct: 70 tggatcccacagt 82
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctctac 178
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>40435_gma-MIR159d:mirbase
Length = 103
Score = 61.9 bits (31), Expect = 2e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 43 attgagctgctaagctatggatcccacagtactacccat 81
||||||||||| |||||||||||||||||| ||||||||
Sbjct: 7 attgagctgcttagctatggatcccacagttctacccat 45
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctctacat 180
||||||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctctacat 175
>39804_aly-MIR159a:mirbase
Length = 222
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctctacat 180
||||||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctctacat 206
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 agctgctaagctatggatccca 68
||||||||||||||||||||||
Sbjct: 66 agctgctaagctatggatccca 87
>40311_bra-MIR159a:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctctaca 179
|||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctctaca 179
|||||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctctaca 183
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 ttggattgaagggagctctaca 179
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41528_sly-MIR159:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 3 tggagctccttgaagtccaaca 24
||||||||||||||||||||||
Sbjct: 1 tggagctccttgaagtccaaca 22
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctcta 177
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
>40017_ath-MIR159b:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 agctgctaagctatggatccca 68
||||||||||||||||||||||
Sbjct: 48 agctgctaagctatggatccca 69
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctct 176
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
>40016_ath-MIR159a:mirbase
Length = 184
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 agctgctaagctatggatccca 68
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctctac 178
||||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctctac 184
>39805_aly-MIR159b:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 47 agctgctaagctatggatccca 68
||||||||||||||||||||||
Sbjct: 60 agctgctaagctatggatccca 81
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 157 tttggattgaagggagctct 176
||||||||||||||||||||
Sbjct: 169 tttggattgaagggagctct 188
