miRNEST 2.0, an integrative microRNA resource :: BLAST
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 137 bits (69), Expect = 2e-33
Identities = 90/97 (92%)
Strand = Plus / Plus
Query: 11 ggtgatgctgttgacagaagatagagagcactgatgatgaaatgcatgaaagggaatggc 70
|||||||||||||||||||||||||||||||||| ||||||||||||| | ||| ||
Sbjct: 1 ggtgatgctgttgacagaagatagagagcactgacgatgaaatgcatggagcttaattgc 60
Query: 71 atctcactcctttgtgctctctagtcttctgtcatca 107
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctcactcctttgtgctctctagtcttctgtcatca 97
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 135 bits (68), Expect = 9e-33
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 16 tgctgttgacagaagatagagagcactgatgatgaaatgcatgaaagggaatggcatctc 75
|||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||
Sbjct: 1 tgctgttgacagaagatagagagcacagatgatgaaatgcatggaaggcaatggcatctc 60
Query: 76 actcctttgtgctctctagtcttctgtcatca 107
| ||||||||||||| || |||||||||||||
Sbjct: 61 attcctttgtgctctttattcttctgtcatca 92
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 129 bits (65), Expect = 5e-31
Identities = 89/97 (91%)
Strand = Plus / Plus
Query: 11 ggtgatgctgttgacagaagatagagagcactgatgatgaaatgcatgaaagggaatggc 70
||||||| ||||||||||||||||||||||| |||||||||||||||| | ||| ||
Sbjct: 1 ggtgatgttgttgacagaagatagagagcacagatgatgaaatgcatggagcttaattgc 60
Query: 71 atctcactcctttgtgctctctagtcttctgtcatca 107
|||||||||||||||||||||||||||||||||||||
Sbjct: 61 atctcactcctttgtgctctctagtcttctgtcatca 97
>40336_rco-MIR156g:mirbase
Length = 97
Score = 119 bits (60), Expect = 5e-28
Identities = 86/92 (93%), Gaps = 2/92 (2%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgcatgaaagggaatg-gcatctcac 77
|||||||||||||||||||||||||| |||||||||||||| |||| | |||||||||
Sbjct: 4 tgttgacagaagatagagagcactgacgatgaaatgcatgat-gggactctgcatctcac 62
Query: 78 tcctttgtgctctctagtcttctgtcatcatc 109
||||||||||||||||||||||||||||||||
Sbjct: 63 tcctttgtgctctctagtcttctgtcatcatc 94
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 87.7 bits (44), Expect = 2e-18
Identities = 78/89 (87%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgcatgaaagggaatggcatctcact 78
||||||||||||||||||||||| |||||||||||||| ||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcacagatgatgaaatgca----aggagccagcatctcact 64
Query: 79 cctttgtgctctctagtcttctgtcatca 107
||||||||||||||| |||||||||||||
Sbjct: 65 cctttgtgctctctattcttctgtcatca 93
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 87.7 bits (44), Expect = 2e-18
Identities = 84/97 (86%), Gaps = 4/97 (4%)
Strand = Plus / Plus
Query: 11 ggtgatgctgttgacagaagatagagagcactgatgatgaaatgcatgaaagggaatggc 70
||||||| ||||||||||||||||||||||| |||||||| |||||| | | ||
Sbjct: 1 ggtgatgttgttgacagaagatagagagcacagatgatgatgtgcatggagt----ttgc 56
Query: 71 atctcactcctttgtgctctctagtcttctgtcatca 107
|||||||||||||||||||||||| ||||||||||||
Sbjct: 57 atctcactcctttgtgctctctagacttctgtcatca 93
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 87.7 bits (44), Expect = 2e-18
Identities = 86/98 (87%), Gaps = 4/98 (4%)
Strand = Plus / Plus
Query: 10 tggtgatgctgttgacagaagatagagagcactgatgatgaaatgcatgaaagggaatgg 69
|||||||| ||||||||||||||||||||||| |||||||| ||||||| | | | |
Sbjct: 10 tggtgatgttgttgacagaagatagagagcacagatgatgagatgcatg---gagcct-g 65
Query: 70 catctcactcctttgtgctctctagtcttctgtcatca 107
||| |||||||||||||||||||| |||||||||||||
Sbjct: 66 catttcactcctttgtgctctctattcttctgtcatca 103
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 73.8 bits (37), Expect = 3e-14
Identities = 84/98 (85%), Gaps = 5/98 (5%)
Strand = Plus / Plus
Query: 11 ggtgatgctgttgacagaagatagagagcactgatgatgaaatgcatgaaagggaat-gg 69
||||||| ||||||||||||||||||||||| |||||||| |||| || ||| | |
Sbjct: 1 ggtgatgttgttgacagaagatagagagcacagatgatgatatgc----aatggactctg 56
Query: 70 catctcactcctttgtgctctctagtcttctgtcatca 107
|||| ||||||||||||||||||| ||||||||||||
Sbjct: 57 catcccactcctttgtgctctctatgcttctgtcatca 94
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 73.8 bits (37), Expect = 3e-14
Identities = 75/85 (88%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcactgatgatgaaatgcatgaaagggaatggcatctcactcct 81
|||||||||||||||||||| |||||||| ||||||| | | | || ||||||||||||
Sbjct: 1 tgacagaagatagagagcacagatgatgatatgcatgga-gagtctg-catctcactcct 58
Query: 82 ttgtgctctctagtcttctgtcatc 106
|||||||||||| |||||||||||
Sbjct: 59 ttgtgctctctatgcttctgtcatc 83
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgcat 57
||||||||||||||||||||||| |||||||| ||||||
Sbjct: 4 tgttgacagaagatagagagcacagatgatgatatgcat 42
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
|||| |||||||||||||||||||| ||||||||||||
Sbjct: 132 gcatatcactcctttgtgctctctatgcttctgtcatca 170
>40428_gma-MIR156d:mirbase
Length = 151
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgcat 57
||||||||||||||||||||||| |||||||| ||||||
Sbjct: 19 tgttgacagaagatagagagcacagatgatgatatgcat 57
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
|||||| |||||||||||||||||| ||||||||||||
Sbjct: 96 gcatcttactcctttgtgctctctatacttctgtcatca 134
>40337_rco-MIR156h:mirbase
Length = 97
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
||||||||||||||||||||||||| ||||||||||||
Sbjct: 54 gcatctcactcctttgtgctctctatgcttctgtcatca 92
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatga 50
||||||||||||||||||||||| ||||||||
Sbjct: 4 tgttgacagaagatagagagcacagatgatga 35
>40011_ath-MIR157b:mirbase
Length = 132
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
|||||| ||||||||||||||||||| ||||||||||||
Sbjct: 73 gcatcttactcctttgtgctctctagccttctgtcatca 111
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgat 48
||||||||||||||||||||||| ||||||
Sbjct: 17 tgttgacagaagatagagagcacagatgat 46
>40010_ath-MIR157a:mirbase
Length = 98
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
|||||| ||||||||||||||||||| ||||||||||||
Sbjct: 58 gcatcttactcctttgtgctctctagccttctgtcatca 96
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatga 50
||||||||||||||||||||||| ||||||||
Sbjct: 2 tgttgacagaagatagagagcacagatgatga 33
>39798_aly-MIR157a:mirbase
Length = 123
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
|||||| ||||||||||||||||||| ||||||||||||
Sbjct: 70 gcatcttactcctttgtgctctctagccttctgtcatca 108
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgat 48
||||||||||||||||||||||| ||||||
Sbjct: 14 tgttgacagaagatagagagcacagatgat 43
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 12 gtgatgctgttgacagaagatagagagcactgatgatg 49
|||||| ||||||||||||||||||||||| |||||||
Sbjct: 2 gtgatgttgttgacagaagatagagagcacagatgatg 39
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 71 atctcactcctttgtgctctctagtcttctgtcatca 107
||||||||||||||||||||||| |||||| |||||
Sbjct: 58 atctcactcctttgtgctctctatgcttctgccatca 94
>41077_gra-MIR157b:mirbase
Length = 91
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 69 gcatctcactcctttgtgctctctagtcttctgtcatcatc 109
||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 51 gcatcccactcctttgtgctctctatgcttctgtcatcatc 91
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatg 49
||||||||||||||||||||||| |||||||
Sbjct: 3 tgttgacagaagatagagagcacagatgatg 33
>41525_sly-MIR156a:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcactgatgatgaaatgc 55
|||||||||||||||||||||| ||||||| ||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgc 35
>41076_gra-MIR157a:mirbase
Length = 101
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatg 49
||||||||||||||||||||||| |||||||
Sbjct: 3 tgttgacagaagatagagagcacagatgatg 33
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
||||| |||||||||||||||| || ||||||||||||
Sbjct: 61 gcatcccactcctttgtgctctttatgcttctgtcatca 99
>39799_aly-MIR157b:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 69 gcatctcactcctttgtgctctctagtcttctgtcatca 107
|||||| |||||||||||||||||| ||||||||||||
Sbjct: 58 gcatcttactcctttgtgctctctaagcttctgtcatca 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatga 47
||||||||||||||||||||||| |||||
Sbjct: 2 tgttgacagaagatagagagcacagatga 30
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 78 tcctttgtgctctctagtcttctgtcatca 107
||||||||||||||||| ||||||||||||
Sbjct: 89 tcctttgtgctctctagacttctgtcatca 118
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgcat 57
|||||||||||||||||| ||||| | ||||| ||||||
Sbjct: 4 tgttgacagaagatagagggcactaaggatgatatgcat 42
>40310_bra-MIR157a:mirbase
Length = 149
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgca 56
|||||||||||||||||||||||| | ||||| |||||
Sbjct: 12 tgttgacagaagatagagagcactaaggatgacatgca 49
>40304_bol-MIR157a:mirbase
Length = 106
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgca 56
|||||||||||||||||||||||| | ||||| |||||
Sbjct: 4 tgttgacagaagatagagagcactaaggatgacatgca 41
>40260_bna-MIR156c:mirbase
Length = 155
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgca 56
|||||||||||||||||||||||| | ||||| |||||
Sbjct: 16 tgttgacagaagatagagagcactaaggatgacatgca 53
>40259_bna-MIR156b:mirbase
Length = 208
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgca 56
|||||||||||||||||||||||| | ||||| |||||
Sbjct: 23 tgttgacagaagatagagagcactaaggatgacatgca 60
>40012_ath-MIR157c:mirbase
Length = 217
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgca 56
|||||||||||||||||||||||| | ||||| |||||
Sbjct: 22 tgttgacagaagatagagagcactaaggatgacatgca 59
>39800_aly-MIR157c:mirbase
Length = 293
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcactgatgatgaaatgca 56
|||||||||||||||||||||||| | ||||| |||||
Sbjct: 53 tgttgacagaagatagagagcactaaggatgacatgca 90
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcactgatgatgaaatgcatg 58
|||||||||||||||||||| ||||| ||| ||||||
Sbjct: 1 tgacagaagatagagagcacagatgacgaattgcatg 37
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 ctgttgacagaagatagagagcac 41
||||||||||||||||||||||||
Sbjct: 8 ctgttgacagaagatagagagcac 31
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcac 41
|||||||||||||||||||||||
Sbjct: 19 tgttgacagaagatagagagcac 41
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcac 41
|||||||||||||||||||||||
Sbjct: 4 tgttgacagaagatagagagcac 26
>40431_gma-MIR156g:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcac 41
|||||||||||||||||||||||
Sbjct: 22 tgttgacagaagatagagagcac 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 21 ttgacagaagatagagagcac 41
|||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcac 87
>40427_gma-MIR156c:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcac 41
|||||||||||||||||||||||
Sbjct: 144 tgttgacagaagatagagagcac 166
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 83 tgtgctctctagtcttctgtcatcatc 109
||||||||||| |||||||||||||||
Sbjct: 84 tgtgctctctactcttctgtcatcatc 110
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcac 41
|||||||||||||||||||||||
Sbjct: 21 tgttgacagaagatagagagcac 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 78 tcctttgtgctctctagtcttctgtcatca 107
|||||||||||||||| ||||||||||||
Sbjct: 86 tcctttgtgctctctaagcttctgtcatca 115
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcac 41
|||||||||||||||||||||||
Sbjct: 21 tgttgacagaagatagagagcac 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 78 tcctttgtgctctctagtcttctgtcatca 107
|||||||||||||||| ||||||||||||
Sbjct: 86 tcctttgtgctctctaagcttctgtcatca 115
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 83 tgtgctctctagtcttctgtcatcatc 109
||||||||||| |||||||||||||||
Sbjct: 80 tgtgctctctactcttctgtcatcatc 106
>40335_rco-MIR156f:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tgttgacagaagatagagagcac 41
|||||||||||||||||||||||
Sbjct: 4 tgttgacagaagatagagagcac 26
>39801_aly-MIR157d:mirbase
Length = 256
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcactgatgatgaaatgca 56
||||||||||||||||||||| | ||||| |||||
Sbjct: 38 tgacagaagatagagagcactaaggatgatatgca 72
>39727_smo-MIR156b:mirbase
Length = 112
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 tgctgttgacagaagatagagagcac 41
||||| ||||||||||||||||||||
Sbjct: 6 tgctgctgacagaagatagagagcac 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 84 gtgctctctagtcttctgtcatca 107
|||||||||| |||||||||||||
Sbjct: 80 gtgctctctattcttctgtcatca 103
>41527_sly-MIR156c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcac 41
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttgacagaagatagagagcac 41
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>40013_ath-MIR157d:mirbase
Length = 221
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcact 42
|||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcact 44
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcac 41
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22
>39415_pta-MIR156a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 tgacagaagatagagagcac 41
||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcac 22