miRNEST 2.0, an integrative microRNA resource :: BLAST
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 252 bits (127), Expect = 9e-68
Identities = 165/177 (93%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 20 gtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatg 79
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 80 gatcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatattt 139
|||||||||||||||||||||| | | |||||||||||||||||||||||||||| |
Sbjct: 61 gatcccacagttctacccatcagcatg---ttttgtggtagtcttgtggcttccatatct 117
Query: 140 ggggagcttcatttgcctttatagtattaaccttctttggattgaagggagctctac 196
|||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 118 ggggagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 252 bits (127), Expect = 9e-68
Identities = 165/177 (93%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 20 gtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatg 79
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 80 gatcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatattt 139
|||||||||||||||||||||| | | |||||||||||||||||||||||||||| |
Sbjct: 61 gatcccacagttctacccatcagcatg---ttttgtggtagtcttgtggcttccatatct 117
Query: 140 ggggagcttcatttgcctttatagtattaaccttctttggattgaagggagctctac 196
|||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 118 ggggagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174
>40435_gma-MIR159d:mirbase
Length = 103
Score = 196 bits (99), Expect = 5e-51
Identities = 102/103 (99%)
Strand = Plus / Plus
Query: 55 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
Query: 115 tggtagtcttgtggcttccatatttggggagcttcatttgcct 157
||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
>40338_rco-MIR159:mirbase
Length = 180
Score = 93.7 bits (47), Expect = 5e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
||||||||||||||||||||||| ||||||||| ||||| ||||||||||| ||||||
Sbjct: 2 agtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctat 61
Query: 79 ggatcccacag 89
|||||||||||
Sbjct: 62 ggatcccacag 72
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 170 ccttctttggattgaagggagctctaca 197
|||| |||||||||||||||||||||||
Sbjct: 150 ccttgtttggattgaagggagctctaca 177
>40397_ahy-MIR159:mirbase
Length = 197
Score = 89.7 bits (45), Expect = 8e-19
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
|||||||||||||||||||||| |||| |||| ||||| ||||||||||| ||||||
Sbjct: 1 agtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctat 60
Query: 79 ggatcccacagttctacccat 99
|||||||||||| ||||||||
Sbjct: 61 ggatcccacagtactacccat 81
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 170 ccttctttggattgaagggagctctaca 197
|||| |||||||||||||||||||||||
Sbjct: 152 ccttatttggattgaagggagctctaca 179
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 85.7 bits (43), Expect = 1e-17
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
||||||||||||||||||||||| |||| ||||||||||| ||||||||||| | |||
Sbjct: 7 agtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttat 66
Query: 79 ggatcccacag 89
|||||||||||
Sbjct: 67 ggatcccacag 77
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 170 ccttctttggattgaagggagctctacacc 199
|||| |||||||||||||||||||||||||
Sbjct: 155 ccttgtttggattgaagggagctctacacc 184
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 75.8 bits (38), Expect = 1e-14
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
||||||||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||
Sbjct: 9 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68
Query: 79 ggatcc 84
||||||
Sbjct: 69 ggatcc 74
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 175 tttggattgaagggagctctacaccc 200
||||||||||||||||||||| ||||
Sbjct: 154 tttggattgaagggagctctaaaccc 179
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 75.8 bits (38), Expect = 1e-14
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 19 agtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctat 78
||||||||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||
Sbjct: 9 agtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctat 68
Query: 79 ggatcc 84
||||||
Sbjct: 69 ggatcc 74
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 175 tttggattgaagggagctctacaccc 200
||||||||||||||||||||| ||||
Sbjct: 154 tttggattgaagggagctctaaaccc 179
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 69.9 bits (35), Expect = 8e-13
Identities = 68/79 (86%)
Strand = Plus / Plus
Query: 11 gattatgaagtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgc 70
||||||| ||||||||||||||||||||||| || | || | |||||| || |||||||
Sbjct: 1 gattatggagtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgc 60
Query: 71 ttagctatggatcccacag 89
| ||||||| |||||||||
Sbjct: 61 tgagctatgaatcccacag 79
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 175 tttggattgaagggagctcta 195
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>41218_csi-MIR159:mirbase
Length = 216
Score = 65.9 bits (33), Expect = 1e-11
Identities = 64/73 (87%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 19 agtggagctccttgaagtccaattgaggatcttact-gggtgaattgagctgcttagcta 77
|||||||||||||||||||||| |||| ||| | |||| |||||||||||| |||||
Sbjct: 10 agtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagcta 69
Query: 78 tggatcccacagt 90
|||||||||||||
Sbjct: 70 tggatcccacagt 82
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 175 tttggattgaagggagctctac 196
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>40311_bra-MIR159a:mirbase
Length = 185
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 171 cttctttggattgaagggagctctaca 197
|||||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 171 cttctttggattgaagggagctctaca 197
|||||||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctctaca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 171 cttctttggattgaagggagctctaca 197
|||||||||||||||||||||||||||
Sbjct: 179 cttctttggattgaagggagctctaca 205
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 172 ttctttggattgaagggagctctaca 197
||||||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctctaca 174
Score = 48.1 bits (24), Expect = 3e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 111 tttgtggtagtcttgtggcttccatatttggggagc 146
||||||||||| ||||||||||||||| | ||||||
Sbjct: 91 tttgtggtagttttgtggcttccatatctagggagc 126
Score = 42.1 bits (21), Expect = 2e-04
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 64 gagctgcttagctatggatcccacagttctacccatc 100
||||||||||||||||| |||| || ||||||||||
Sbjct: 48 gagctgcttagctatgggtccctcaactctacccatc 84
>40016_ath-MIR159a:mirbase
Length = 184
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 171 cttctttggattgaagggagctctac 196
||||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctctac 184
>41922_osa-MIR159f:mirbase
Length = 188
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 176 ttggattgaagggagctctacacc 199
||||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctacacc 182
>40017_ath-MIR159b:mirbase
Length = 196
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 171 cttctttggattgaagggagctct 194
||||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctct 187
>39805_aly-MIR159b:mirbase
Length = 202
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 171 cttctttggattgaagggagctct 194
||||||||||||||||||||||||
Sbjct: 165 cttctttggattgaagggagctct 188
