miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40432_gma-MIR159a:mirbase
          Length = 214

 Score =  196 bits (99), Expect = 2e-51
 Identities = 102/103 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 55  gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 114

                                                      
Query: 61  tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
           ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 115 tggtagtcttgtggcttccatatttggggagcttcatttgcct 157




>41024_pvu-MIR159a:mirbase
          Length = 174

 Score =  137 bits (69), Expect = 2e-33
 Identities = 95/103 (92%), Gaps = 3/103 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
           ||||| |||||||||||||||||||||||||||||||||||||||||  | ||   ||||
Sbjct: 36  gggtggattgagctgcttagctatggatcccacagttctacccatcagcatgt---tttg 92

                                                      
Query: 61  tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
           ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 93  tggtagtcttgtggcttccatatctggggagcttcatctgcct 135




>41023_pvu-MIR159a:mirbase
          Length = 174

 Score =  137 bits (69), Expect = 2e-33
 Identities = 95/103 (92%), Gaps = 3/103 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
           ||||| |||||||||||||||||||||||||||||||||||||||||  | ||   ||||
Sbjct: 36  gggtggattgagctgcttagctatggatcccacagttctacccatcagcatgt---tttg 92

                                                      
Query: 61  tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
           ||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 93  tggtagtcttgtggcttccatatctggggagcttcatctgcct 135




>40397_ahy-MIR159:mirbase
          Length = 197

 Score = 61.9 bits (31), Expect = 8e-11
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                 
Query: 7  attgagctgcttagctatggatcccacagttctacccat 45
          ||||||||||| |||||||||||||||||| ||||||||
Sbjct: 43 attgagctgctaagctatggatcccacagtactacccat 81




>41218_csi-MIR159:mirbase
          Length = 216

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                              
Query: 1  gggtgaattgagctgcttagctatggatcccacagt 36
          |||| |||||||||||| ||||||||||||||||||
Sbjct: 47 gggtaaattgagctgctgagctatggatcccacagt 82




>40657_mtr-MIR159a:mirbase
          Length = 183

 Score = 56.0 bits (28), Expect = 5e-09
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 57  tttgtggtagtcttgtggcttccatatctggggagc 92
           ||||||||||| ||||||||||||||||| ||||||
Sbjct: 91  tttgtggtagttttgtggcttccatatctagggagc 126




>40338_rco-MIR159:mirbase
          Length = 180

 Score = 50.1 bits (25), Expect = 3e-07
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                       
Query: 7  attgagctgcttagctatggatcccacag 35
          ||||||||||| |||||||||||||||||
Sbjct: 44 attgagctgctgagctatggatcccacag 72