miRNEST 2.0, an integrative microRNA resource :: BLAST
>41578_vvi-MIR162:mirbase
Length = 103
Score = 85.7 bits (43), Expect = 6e-18
Identities = 91/103 (88%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 2 tgaagtcactggatgcagcggttcatcgatctcttcctg-aatcgttgt-ttaacatcag 59
||||||||||||||||||||||||||||||||||||||| ||| ||||| || | |||
Sbjct: 1 tgaagtcactggatgcagcggttcatcgatctcttcctgaaattgttgtgaaaaaagcag 60
Query: 60 aaccatgaatcgatcgataaacctctgcatccagcgctcactc 102
| || |||||| ||||||||||||||||||||||| ||||||
Sbjct: 61 -atcaagaatcggtcgataaacctctgcatccagcgttcactc 102
>41220_csi-MIR162:mirbase
Length = 201
Score = 79.8 bits (40), Expect = 4e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccagcgctcactc 102
||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 catgaatcgatcgataaacctctgcatccagcgctcactc 190
Score = 56.0 bits (28), Expect = 5e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 gtgaagtcactggatgcagcggttcatcgatc 32
|||||||||||||| |||||||||||||||||
Sbjct: 80 gtgaagtcactggaggcagcggttcatcgatc 111
>40663_mtr-MIR162:mirbase
Length = 124
Score = 77.8 bits (39), Expect = 1e-15
Identities = 86/100 (86%), Gaps = 5/100 (5%)
Strand = Plus / Plus
Query: 6 gtcactggatgcagcggttcatcgatctcttcctgaatcgttgtttaac----atcagaa 61
|||||||||||||||||||||||||||| ||||||||| |||||| | | | ||
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctgaatt-ttgtttgtctcgtaaaacaa 75
Query: 62 ccatgaatcgatcgataaacctctgcatccagcgctcact 101
||||||||| |||||||||||||||||||||||||||||
Sbjct: 76 acatgaatcggtcgataaacctctgcatccagcgctcact 115
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 75.8 bits (38), Expect = 5e-15
Identities = 84/99 (84%), Gaps = 4/99 (4%)
Strand = Plus / Plus
Query: 3 gaagtcactggatgcagcggttcatcgatctcttcctg----aatcgttgtttaacatca 58
|||| ||||||| ||||||||||||||||||||||||| | | ||||||| || |
Sbjct: 4 gaagacactggaggcagcggttcatcgatctcttcctggccaattttttgtttagcacga 63
Query: 59 gaaccatgaatcgatcgataaacctctgcatccagcgct 97
|| |||||| ||||||||||||||||||||||||||||
Sbjct: 64 aaaacatgaaccgatcgataaacctctgcatccagcgct 102
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 75.8 bits (38), Expect = 5e-15
Identities = 83/96 (86%), Gaps = 4/96 (4%)
Strand = Plus / Plus
Query: 4 aagtcactggatgcagcggttcatcgatctcttcctg---aatcgttgtttaacatcaga 60
||||||||||| ||||||||||||||||||||||||| | | | ||| || |||| |
Sbjct: 7 aagtcactggaggcagcggttcatcgatctcttcctgggaatttggtgtgaaaaatcaca 66
Query: 61 -accatgaatcgatcgataaacctctgcatccagcg 95
| |||||||||||||||||||||||||||||||||
Sbjct: 67 gaacatgaatcgatcgataaacctctgcatccagcg 102
>39813_aly-MIR162b:mirbase
Length = 184
Score = 71.9 bits (36), Expect = 9e-14
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccagcgctcactc 102
||||||||||||||||||||||||||||||||||| ||||
Sbjct: 103 catgaatcgatcgataaacctctgcatccagcgcttactc 142
>40342_rco-MIR162:mirbase
Length = 101
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccagcgct 97
|||||||||||||||||||||||||||||||||||
Sbjct: 66 catgaatcgatcgataaacctctgcatccagcgct 100
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 7 tcactggatgcagcggttcatcgatctcttcctg 40
|||||||| |||||||||||||||||||||||||
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctg 34
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccagcgc 96
||||||||||||||||||||||||||||||||||
Sbjct: 84 catgaatcgatcgataaacctctgcatccagcgc 117
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 8 cactggatgcagcggttcatcgatctcttcctga 41
||||||| ||||||||||||||||||||||||||
Sbjct: 22 cactggaggcagcggttcatcgatctcttcctga 55
>40025_ath-MIR162b:mirbase
Length = 111
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccagcgct 97
||||||||||||||||||||||||||||||||
Sbjct: 72 gaatcgatcgataaacctctgcatccagcgct 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 gtgaagtcactggatgcagcggttcatcgatc 32
|||||||| ||||| |||||||||||||||||
Sbjct: 3 gtgaagtcgctggaggcagcggttcatcgatc 34
>41090_tcc-MIR162:mirbase
Length = 131
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 cactggatgcagcggttcatcgatctcttcctg 40
||||||| |||||||||||||||||||||||||
Sbjct: 19 cactggaggcagcggttcatcgatctcttcctg 51
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccag 93
||||| |||||||||||||||||||||||||
Sbjct: 81 catgattcgatcgataaacctctgcatccag 111
>40024_ath-MIR162a:mirbase
Length = 140
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccagcg 95
||||||| |||||||||||||||||||||||||
Sbjct: 79 catgaatagatcgataaacctctgcatccagcg 111
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 5 agtcactggatgcagcggttcatcgatctcttcctg 40
|||| ||||| |||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctg 55
>39812_aly-MIR162a:mirbase
Length = 228
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 63 catgaatcgatcgataaacctctgcatccagcg 95
||||||| |||||||||||||||||||||||||
Sbjct: 126 catgaatagatcgataaacctctgcatccagcg 158
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 5 agtcactggatgcagcggttcatcgatctcttcctg 40
|||| ||||| |||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98
>42502_sbi-MIR162:mirbase
Length = 127
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
||||||||||||||||||||||||||||
Sbjct: 100 gaatcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
||||||||||||||||||||||||||||
Sbjct: 136 gaatcgatcgataaacctctgcatccag 163
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 3 gaagtcactggatgcagcggttcatcgatctcttcctgaa 42
|||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 5e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 3 gaagtcactggatgcagcggttcatcgatctcttcctgaa 42
|||| ||||||| |||||||||||||||||| ||||||||
Sbjct: 4 gaagacactggaggcagcggttcatcgatcttttcctgaa 43
>41736_bdi-MIR162:mirbase
Length = 133
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatcc 91
||||||||||||||||||||||||||
Sbjct: 104 gaatcgatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
|||||| |||||||||||||||||||||
Sbjct: 103 gaatcggtcgataaacctctgcatccag 130
>41930_osa-MIR162b:mirbase
Length = 134
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
|||||||||||||| |||||||||||||
Sbjct: 97 gaatcgatcgataagcctctgcatccag 124
>41530_sly-MIR162:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 66 gaatcgatcgataaacctctgcatccag 93
|||||| |||||||||||||||||||||
Sbjct: 72 gaatcggtcgataaacctctgcatccag 99
