miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40446_gma-MIR167f:mirbase
Length = 109
Score = 200 bits (101), Expect = 1e-52
Identities = 107/109 (98%)
Strand = Plus / Plus
Query: 1 tcatgcaccactaccagttgaagctgccagcatgatcttaacttccctcacttgccgtgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 tcatgcaccactaccagttgaagctgccagcatgatcttaacttccctcacttgctgtgg 60
Query: 61 aaagatcagatcatgtggcagtttcacctagtagttgctggccgcatga 109
||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 aaagatcagatcatgtggcagtttcacctagtagttgttggccgcatga 109
>41345_ptc-MIR167g:mirbase
Length = 86
Score = 105 bits (53), Expect = 7e-24
Identities = 74/81 (91%)
Strand = Plus / Plus
Query: 9 cactaccagttgaagctgccagcatgatcttaacttccctcacttgccgtggaaagatca 68
||||| |||||||||||||||||||||||||||| |||||| ||| || ||||||| ||
Sbjct: 1 cactatcagttgaagctgccagcatgatcttaacctccctcctttgtcgaggaaagaaca 60
Query: 69 gatcatgtggcagtttcacct 89
|||||||||||||||||||||
Sbjct: 61 gatcatgtggcagtttcacct 81
>40401_ahy-MIR167:mirbase
Length = 118
Score = 79.8 bits (40), Expect = 4e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 1 tcatgcaccactaccagttgaagctgccagcatgatcttaactt 44
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3 tcatgcaccactacaagttgaagctgccagcatgatcttaactt 46
>40400_ahy-MIR167:mirbase
Length = 118
Score = 79.8 bits (40), Expect = 4e-16
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 1 tcatgcaccactaccagttgaagctgccagcatgatcttaactt 44
|||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3 tcatgcaccactacaagttgaagctgccagcatgatcttaactt 46
>41228_csi-MIR167b:mirbase
Length = 123
Score = 77.8 bits (39), Expect = 1e-15
Identities = 77/87 (88%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 5 gcaccactaccagttgaagctgccagcatgatcttaacttccctcacttgc-cgtggaaa 63
||||||||| ||| |||||||||||||||||||||||||| |||| |||| || ||||
Sbjct: 6 gcaccactatcagatgaagctgccagcatgatcttaactttcctcctttgctcgaggaat 65
Query: 64 gat-cagatcatgtggcagtttcacct 89
||| ||||||||| |||||||||||||
Sbjct: 66 gatacagatcatgcggcagtttcacct 92
>40353_rco-MIR167b:mirbase
Length = 80
Score = 67.9 bits (34), Expect = 1e-12
Identities = 64/74 (86%)
Strand = Plus / Plus
Query: 15 cagttgaagctgccagcatgatcttaacttccctcacttgccgtggaaagatcagatcat 74
|||||||||||||||||||||||| || | |||| || | | ||| ||||||||||||
Sbjct: 2 cagttgaagctgccagcatgatctaaatcttcctccctcgttgaggagagatcagatcat 61
Query: 75 gtggcagtttcacc 88
||||||||||||||
Sbjct: 62 gtggcagtttcacc 75
>41595_vvi-MIR167e:mirbase
Length = 90
Score = 65.9 bits (33), Expect = 6e-12
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 9 cactaccagttgaagctgccagcatgatcttaacttccctcacttgccgtggaaagatca 68
||||| |||||||||||||||||||||||| ||||| | || ||| | | ||||||
Sbjct: 1 cactatcagttgaagctgccagcatgatctaaacttgcttccctttgtgaacagagatca 60
Query: 69 gatcatgtggcagtttcacct 89
|||||||||||||||||||||
Sbjct: 61 gatcatgtggcagtttcacct 81
>41344_ptc-MIR167f:mirbase
Length = 87
Score = 63.9 bits (32), Expect = 2e-11
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 15 cagttgaagctgccagcatgatcttaacttccctcacttgccgtggaaag-atcagatca 73
|||||||||||||||||||||||||| | | |||| ||| | |||||| | |||||||
Sbjct: 7 cagttgaagctgccagcatgatcttagccttcctcctttgttgaggaaagaaacagatca 66
Query: 74 tgtggcagtttcacct 89
||||||||||||||||
Sbjct: 67 tgtggcagtttcacct 82
>41098_tcc-MIR167a:mirbase
Length = 111
Score = 61.9 bits (31), Expect = 9e-11
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 8 ccactaccagttgaagctgccagcatgatcttaacttcc 46
|||||| |||||||||||||||||||||||| |||||||
Sbjct: 10 ccactagcagttgaagctgccagcatgatctaaacttcc 48
>41593_vvi-MIR167c:mirbase
Length = 91
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 15 cagttgaagctgccagcatgatcttaacttccct 48
|||||||||||||||||||||||| |||||||||
Sbjct: 7 cagttgaagctgccagcatgatctcaacttccct 40
>41533_sly-MIR167:mirbase
Length = 116
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 4 tgcaccactaccagttgaagctgccagcatgatcttaactt 44
|||| ||||| |||||||||||||||||||||||| |||||
Sbjct: 4 tgcagcactagcagttgaagctgccagcatgatctaaactt 44
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 59 ggaaagatcagatcatgtggcag 81
|||||||||||||||||||||||
Sbjct: 70 ggaaagatcagatcatgtggcag 92
>41100_tcc-MIR167c:mirbase
Length = 112
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 cagttgaagctgccagcatgatcttaa 41
|||||||||||||||||||||||||||
Sbjct: 17 cagttgaagctgccagcatgatcttaa 43
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 59 ggaaagatcagatcatgtggcagtttcacct 89
|||||||||||||||| ||||||||||||||
Sbjct: 63 ggaaagatcagatcatatggcagtttcacct 93
>41341_ptc-MIR167c:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 cactaccagttgaagctgccagcatgatct 38
||||| ||||||||||||||||||||||||
Sbjct: 1 cactagcagttgaagctgccagcatgatct 30
>41339_ptc-MIR167a:mirbase
Length = 89
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 9 cactaccagttgaagctgccagcatgatct 38
||||| ||||||||||||||||||||||||
Sbjct: 1 cactagcagttgaagctgccagcatgatct 30
>41343_ptc-MIR167e:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 agttgaagctgccagcatgatcttaactt 44
||||||||||||||||||||||| |||||
Sbjct: 8 agttgaagctgccagcatgatctgaactt 36
>41280_ctr-MIR167:mirbase
Length = 121
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 agttgaagctgccagcatgatcttaactt 44
||||||||||||||||||||||| |||||
Sbjct: 21 agttgaagctgccagcatgatctgaactt 49
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 cagatcatgtggcagtttcaccta 90
|||||||| |||||||||||||||
Sbjct: 78 cagatcatctggcagtttcaccta 101
>41227_csi-MIR167a:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 agttgaagctgccagcatgatcttaactt 44
||||||||||||||||||||||| |||||
Sbjct: 12 agttgaagctgccagcatgatctgaactt 40
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 cagatcatgtggcagtttcaccta 90
|||||||| |||||||||||||||
Sbjct: 69 cagatcatctggcagtttcaccta 92
>41209_ccl-MIR167b:mirbase
Length = 202
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 agttgaagctgccagcatgatcttaactt 44
||||||||||||||||||||||| |||||
Sbjct: 18 agttgaagctgccagcatgatctgaactt 46
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 cagatcatgtggcagtttcaccta 90
|||||||| |||||||||||||||
Sbjct: 75 cagatcatctggcagtttcaccta 98
>41208_ccl-MIR167a:mirbase
Length = 121
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 agttgaagctgccagcatgatcttaactt 44
||||||||||||||||||||||| |||||
Sbjct: 21 agttgaagctgccagcatgatctgaactt 49
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 cagatcatgtggcagtttcaccta 90
|||||||| |||||||||||||||
Sbjct: 78 cagatcatctggcagtttcaccta 101
>41592_vvi-MIR167b:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cagttgaagctgccagcatgatct 38
||||||||||||||||||||||||
Sbjct: 7 cagttgaagctgccagcatgatct 30
Score = 46.1 bits (23), Expect = 5e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 59 ggaaagatcagatcatgtggcagtttcacct 89
||||||| ||||||||||||||||||||||
Sbjct: 60 ggaaagactagatcatgtggcagtttcacct 90
>41346_ptc-MIR167h:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 59 ggaaagatcagatcatgtggcagtttcaccta 90
||||||| |||||||||||||||||||||||
Sbjct: 56 ggaaagactagatcatgtggcagtttcaccta 87
>40632_gso-MIR167a:mirbase
Length = 80
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cagttgaagctgccagcatgatct 38
||||||||||||||||||||||||
Sbjct: 5 cagttgaagctgccagcatgatct 28
>40447_gma-MIR167g:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 15 cagttgaagctgccagcatgatct 38
||||||||||||||||||||||||
Sbjct: 4 cagttgaagctgccagcatgatct 27
>40645_lja-MIR167:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 agttgaagctgccagcatgatct 38
|||||||||||||||||||||||
Sbjct: 18 agttgaagctgccagcatgatct 40
>40354_rco-MIR167c:mirbase
Length = 76
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 16 agttgaagctgccagcatgatct 38
|||||||||||||||||||||||
Sbjct: 3 agttgaagctgccagcatgatct 25
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 agatcatgtggcagtttcacct 89
||||||||||||||||||||||
Sbjct: 51 agatcatgtggcagtttcacct 72
>42738_zma-MIR167h:mirbase
Length = 143
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 gttgaagctgccagcatgatct 38
||||||||||||||||||||||
Sbjct: 19 gttgaagctgccagcatgatct 40
>42521_sbi-MIR167c:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 gttgaagctgccagcatgatct 38
||||||||||||||||||||||
Sbjct: 18 gttgaagctgccagcatgatct 39
>41752_bdi-MIR167d:mirbase
Length = 204
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 gttgaagctgccagcatgatct 38
||||||||||||||||||||||
Sbjct: 29 gttgaagctgccagcatgatct 50
>41591_vvi-MIR167a:mirbase
Length = 351
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 gttgaagctgccagcatgatct 38
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>40443_gma-MIR167c:mirbase
Length = 375
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 17 gttgaagctgccagcatgatct 38
||||||||||||||||||||||
Sbjct: 9 gttgaagctgccagcatgatct 30
>42740_zma-MIR167j:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 66 tcagatcatgtggcagtttca 86
|||||||||||||||||||||
Sbjct: 86 tcagatcatgtggcagtttca 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tgaagctgccagcatgatct 38
||||||||||||||||||||
Sbjct: 2 tgaagctgccagcatgatct 21
>42739_zma-MIR167i:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 ttgaagctgccagcatgatct 38
|||||||||||||||||||||
Sbjct: 20 ttgaagctgccagcatgatct 40
>41229_csi-MIR167c:mirbase
Length = 341
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 18 ttgaagctgccagcatgatct 38
|||||||||||||||||||||
Sbjct: 10 ttgaagctgccagcatgatct 30
>42737_zma-MIR167g:mirbase
Length = 243
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tgaagctgccagcatgatct 38
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
>42736_zma-MIR167f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tgaagctgccagcatgatct 38
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
>42735_zma-MIR167e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tgaagctgccagcatgatct 38
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
>42734_zma-MIR167d:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 19 tgaagctgccagcatgatct 38
||||||||||||||||||||
Sbjct: 17 tgaagctgccagcatgatct 36
