miRNEST 2.0, an integrative microRNA resource :: BLAST
>40464_gma-MIR319a:mirbase
Length = 207
Score = 280 bits (141), Expect = 4e-76
Identities = 175/185 (94%), Gaps = 1/185 (0%)
Strand = Plus / Plus
Query: 16 ggtaagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccga 75
|||||||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||
Sbjct: 16 ggtaagagagctttcttcagtccactcatgggtgacagtaagatt-caattagctgccga 74
Query: 76 ctcattcatccaaatgctgagtgaaagcgaagaaagatactcagcaaatgagtgaatgat 135
|||||||||||||||| |||||| ||||||| ||| |||||||||| |||||||||||||
Sbjct: 75 ctcattcatccaaatgttgagtgtaagcgaataaatatactcagcagatgagtgaatgat 134
Query: 136 gcgggagacaaattgattcttaagtttcctgtacttggactgaagggagctccctttttc 195
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 135 gcgggagacaaattgaatcttaagtttcctgtacttggactgaagggagctcccttttcc 194
Query: 196 ttttg 200
|||||
Sbjct: 195 ttttg 199
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 222 bits (112), Expect = 8e-59
Identities = 164/179 (91%), Gaps = 3/179 (1%)
Strand = Plus / Plus
Query: 18 taagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgact 77
||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 1 taagagagctttctttagtccactcatgggtgacaataagatttcaattagctgctgact 60
Query: 78 cattcatccaaatgctgagtgaaagcga-agaaagata--ctcagcaaatgagtgaatga 134
|||||||||||||| ||||| ||| | ||||| ||| |||| |||||||||||||||
Sbjct: 61 cattcatccaaatgttgagtaaaatatatagaaacatatactcatcaaatgagtgaatga 120
Query: 135 tgcgggagacaaattgattcttaagtttcctgtacttggactgaagggagctccctttt 193
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 121 tgcgggagacaaattgaatcttaagtttcctatacttggactgaagggagctccctttt 179
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 174 bits (88), Expect = 2e-44
Identities = 156/176 (88%), Gaps = 2/176 (1%)
Strand = Plus / Plus
Query: 18 taagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgact 77
|||||||||||||||||||||||| ||||||| | || ||||| |||||||||||||||
Sbjct: 8 taagagagctttcttcagtccactcatgggtggtagtaggattt-aattagctgccgact 66
Query: 78 cattcatccaaatgctgagtgaaagcgaagaaagat-actcagcaaatgagtgaatgatg 136
||||||||||||| |||||| |||| | |||| || ||| ||||||||||||||||
Sbjct: 67 cattcatccaaatactgagttaaaggacaaggagattacccagtaaatgagtgaatgatg 126
Query: 137 cgggagacaaattgattcttaagtttcctgtacttggactgaagggagctcccttt 192
||||||||||||||| || |||| ||||||||||||||||||||||||||||||||
Sbjct: 127 cgggagacaaattgaatcctaagcttcctgtacttggactgaagggagctcccttt 182
>41282_ctr-MIR319:mirbase
Length = 186
Score = 170 bits (86), Expect = 3e-43
Identities = 151/169 (89%), Gaps = 4/169 (2%)
Strand = Plus / Plus
Query: 23 gagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactcattc 82
||||||||||| ||||||||||||||| ||||| ||||| |||||||||| |||||||||
Sbjct: 10 gagctttcttcggtccacttatgggtggcaataggattt-aattagctgctgactcattc 68
Query: 83 atccaaatgctgagtgaaagcgaagaaa--gatactcagcaaatgagtgaatgatgcggg 140
|||||||| || ||| |||| | |||| ||||| ||| ||||||||||||||||||||
Sbjct: 69 atccaaatacttagt-aaagggtcgaaatggatacccagtaaatgagtgaatgatgcggg 127
Query: 141 agacaaattgattcttaagtttcctgtacttggactgaagggagctccc 189
||||||||||| ||||||| ||||||| |||||||||||||||||||||
Sbjct: 128 agacaaattgaatcttaagcttcctgtgcttggactgaagggagctccc 176
>40367_rco-MIR319a:mirbase
Length = 211
Score = 127 bits (64), Expect = 4e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 121 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 180
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 137 aaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactgaag 196
Query: 181 ggagctcccttt 192
||||||||||||
Sbjct: 197 ggagctcccttt 208
Score = 95.6 bits (48), Expect = 1e-20
Identities = 73/80 (91%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 18 taagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgact 77
|||||||||||||||||||||||| ||||||| | || ||||| |||||||||||||||
Sbjct: 2 taagagagctttcttcagtccactcatgggtggcggtaggattt-aattagctgccgact 60
Query: 78 cattcatccaaatgctgagt 97
||||||||||||| ||||||
Sbjct: 61 cattcatccaaatactgagt 80
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 119 bits (60), Expect = 9e-28
Identities = 145/173 (83%), Gaps = 9/173 (5%)
Strand = Plus / Plus
Query: 19 aagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactc 78
||||||||||||||||||||||| ||||||| || || |||| ||||||||||||||||
Sbjct: 9 aagagagctttcttcagtccactcatgggtggcagtaggattg-aattagctgccgactc 67
Query: 79 attcatccaaatgctgagtgaaagcgaagaaagatactcagcaaatgagtgaatgatgcg 138
|||||||||||| ||| || || | ||| ||| |||||| |||||||||||
Sbjct: 68 attcatccaaatactgtgttaaggac--------tacccagtaaatgattgaatgatgcg 119
Query: 139 ggagacaaattgattcttaagtttcctgtacttggactgaagggagctccctt 191
|||||||||||| ||||||| | ||||| |||||||||||||||||||||||
Sbjct: 120 ggagacaaattggatcttaagctccctgtgcttggactgaagggagctccctt 172
>41544_sly-MIR319:mirbase
Length = 168
Score = 85.7 bits (43), Expect = 1e-17
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 115 ctcagcaaatgagtgaatgatgcgggag-acaaattgattcttaagtttcctgtacttgg 173
|||||||| ||||||||||| ||||||| |||| |||| |||| || |||||||||||||
Sbjct: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
Query: 174 actgaagggagctcc 188
|||||||||||||||
Sbjct: 154 actgaagggagctcc 168
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 83.8 bits (42), Expect = 5e-17
Identities = 145/176 (82%), Gaps = 5/176 (2%)
Strand = Plus / Plus
Query: 18 taagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgact 77
|||||||||||| ||| |||||||||| | | |||| ||||| |||||| | ||||||
Sbjct: 8 taagagagcttttttcggtccacttatagatagtaatatgattt-aattagttaccgact 66
Query: 78 cattcatccaaatgctgagtgaa-agcgaagaaagatactcagcaaatgagtgaatgatg 136
||||||||||||| |||||| | ||| |||| ||| ||| |||||| ||| |||||
Sbjct: 67 cattcatccaaatactgagttatgagctaagat---tacccagtaaatgaatgagtgatg 123
Query: 137 cgggagacaaattgattcttaagtttcctgtacttggactgaagggagctcccttt 192
||||||||||||| | |||||| ||||| | |||||||||||||||||||||||
Sbjct: 124 cgggagacaaattaaatcttaaacttcctatcattggactgaagggagctcccttt 179
>41185_aqc-MIR319:mirbase
Length = 177
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 121 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 180
|||||| |||||||| ||||||| ||||| ||||| | ||| ||||||||||||||||
Sbjct: 106 aaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactgaag 165
Query: 181 ggagctccct 190
||||||||||
Sbjct: 166 ggagctccct 175
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 60 ttcaattagctgccgactcattcatcca 87
||||||| ||||||||||||||||||||
Sbjct: 40 ttcaatttgctgccgactcattcatcca 67
>40070_ath-MIR319b:mirbase
Length = 172
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 121 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 180
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 103 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 162
Query: 181 ggagctccct 190
||||||||||
Sbjct: 163 ggagctccct 172
>39859_aly-MIR319b:mirbase
Length = 246
Score = 67.9 bits (34), Expect = 3e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 121 aaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttggactgaag 180
|||||| ||||||||||| |||||||||||| |||| | || || | ||||||||||||
Sbjct: 142 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 201
Query: 181 ggagctccct 190
||||||||||
Sbjct: 202 ggagctccct 211
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 19 aagagagctttcttcagtccacttatgg 46
||||||||||||||| ||||||| ||||
Sbjct: 39 aagagagctttcttcggtccactcatgg 66
>40703_mtr-MIR319:mirbase
Length = 207
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctccctttttct 196
||||||||||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctccctttttct 195
Score = 40.1 bits (20), Expect = 7e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 19 aagagagctttcttcagtccacttatgg 46
|||||||||| |||||||||||| ||||
Sbjct: 18 aagagagcttccttcagtccactcatgg 45
>40069_ath-MIR319a:mirbase
Length = 176
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 60 ttcaattagctgccgactcattcatccaaat 90
||||||||||| |||||||||||||||||||
Sbjct: 42 ttcaattagcttccgactcattcatccaaat 72
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 121 aaatgagtgaatgatgcgggagacaaattg 150
|||||| |||||||||||| ||||||||||
Sbjct: 105 aaatgaatgaatgatgcggtagacaaattg 134
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 ttggactgaagggagctccct 190
|||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccct 174
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 164 ctgtacttggactgaagggagctcccttt 192
|||| ||||||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctcccttt 187
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 attagctgccgactcattcatccaaa 89
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 18 taagagagctttcttcagtccacttatgg 46
|||||||||||||||||||||||| ||||
Sbjct: 8 taagagagctttcttcagtccactcatgg 36
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 164 ctgtacttggactgaagggagctcccttt 192
|||| ||||||||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctcccttt 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 attagctgccgactcattcatccaaa 89
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
>40369_rco-MIR319c:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 164 ctgtacttggactgaagggagctcccttt 192
|||| ||||||||||||||||||||||||
Sbjct: 157 ctgtgcttggactgaagggagctcccttt 185
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 18 taagagagctttcttcagtccacttatggg 47
|||||||||| ||||||||||||| |||||
Sbjct: 2 taagagagctctcttcagtccactcatggg 31
>39858_aly-MIR319a:mirbase
Length = 221
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 62 caattagctgccgactcattcatccaaat 90
||||||||| |||||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 121 aaatgagtgaatgatgcgggagacaaattg 150
|||||| |||||||||||| ||||||||||
Sbjct: 128 aaatgaatgaatgatgcggtagacaaattg 157
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 170 ttggactgaagggagctccct 190
|||||||||||||||||||||
Sbjct: 177 ttggactgaagggagctccct 197
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 164 ctgtacttggactgaagggagctccctt 191
|||| |||||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctccctt 183
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 64 attagctgccgactcattcatccaaa 89
||||||||||||||||||||| ||||
Sbjct: 54 attagctgccgactcattcattcaaa 79
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 18 taagagagctttcttcagtccacttatgg 46
||||||||||| |||||||||||| ||||
Sbjct: 8 taagagagcttccttcagtccactcatgg 36
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctccctt 191
|||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccctt 184
>39740_smo-MIR319:mirbase
Length = 215
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctccctt 191
|||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccctt 207
>42781_zma-MIR319b:mirbase
Length = 213
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 aattagctgccgactcattcatccaaatgc 92
||||||||||||||||||||| ||| ||||
Sbjct: 63 aattagctgccgactcattcacccacatgc 92
>42642_tae-MIR319:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctccct 190
||||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctccct 204
>42563_sbi-MIR319:mirbase
Length = 249
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 aattagctgccgactcattcatccaaatgc 92
||||||||||||||||||||| ||| ||||
Sbjct: 75 aattagctgccgactcattcacccacatgc 104
>41995_osa-MIR319b:mirbase
Length = 197
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 63 aattagctgccgactcattcatccaaatgc 92
||||||||||||||||||||| ||| ||||
Sbjct: 53 aattagctgccgactcattcacccacatgc 82
>41770_bdi-MIR319:mirbase
Length = 280
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctccct 190
||||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctccct 246
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 63 aattagctgccgactcattcat 84
||||||||||||||||||||||
Sbjct: 55 aattagctgccgactcattcat 76
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 164 ctgtacttggactgaagggagctcc 188
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>40368_rco-MIR319b:mirbase
Length = 179
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctccct 190
||||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccct 174
>42783_zma-MIR319d:mirbase
Length = 212
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 64 attagctgccgactcattcatccaaatgc 92
|||||||||||||||||||| ||| ||||
Sbjct: 63 attagctgccgactcattcacccacatgc 91
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 164 ctgtacttggactgaagggagctcc 188
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctccc 189
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctccc 189
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctccc 189
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>42780_zma-MIR319a:mirbase
Length = 209
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 170 ttggactgaagggagctccctttt 193
||||||||||||| ||||||||||
Sbjct: 171 ttggactgaagggtgctccctttt 194
>41771_bdi-MIR319b:mirbase
Length = 190
Score = 40.1 bits (20), Expect = 7e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 taagagagctttcttcagtccact 41
|||||||||| |||||||||||||
Sbjct: 6 taagagagctctcttcagtccact 29
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 170 ttggactgaagggagctccc 189
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctcc 188
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctcc 188
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 7e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 169 cttggactgaagggagctcc 188
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
