miRNEST 2.0, an integrative microRNA resource :: BLAST
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||||||||||||||||||||||
Sbjct: 11 agaatctgtaaagctcaggagggatagc 38
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 72 tggcgctatctatcttgagcttcatggcttct 103
|||||||||||||| |||| ||||||| ||||
Sbjct: 77 tggcgctatctatcctgagtttcatgggttct 108
>40468_gma-MIR390a:mirbase
Length = 105
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>40467_gma-MIR390a:mirbase
Length = 105
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>40293_bna-MIR390b:mirbase
Length = 105
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagc 35
>40072_ath-MIR390a:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagc 35
>39862_aly-MIR390a:mirbase
Length = 129
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||||||||||||||||||||||
Sbjct: 19 agaatctgtaaagctcaggagggatagc 46
>41640_vvi-MIR390:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||| ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagc 28
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||| ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagc 28
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||| ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagc 28
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||| ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagc 28
>41237_csi-MIR390:mirbase
Length = 154
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||| ||||||||||||||||||
Sbjct: 11 agaatctgttaagctcaggagggatagc 38
Score = 40.1 bits (20), Expect = 3e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 72 tggcgctatctatcttgagcttcatggcttct 103
|||||||||| ||| |||| ||||||||||||
Sbjct: 96 tggcgctatccatcctgagtttcatggcttct 127
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||| ||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagc 28
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||| ||||||||||||||||||
Sbjct: 8 agaatctgttaagctcaggagggatagc 35
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agaatctgtaaagctcaggagggatagc 28
||||||||| ||||||||||||||||||
Sbjct: 5 agaatctgttaagctcaggagggatagc 32
>40294_bna-MIR390c:mirbase
Length = 128
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 ctgtaaagctcaggagggatagc 28
|||||||||||||||||||||||
Sbjct: 18 ctgtaaagctcaggagggatagc 40
>40292_bna-MIR390a:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 ctgtaaagctcaggagggatagc 28
|||||||||||||||||||||||
Sbjct: 28 ctgtaaagctcaggagggatagc 50
>40371_rco-MIR390a:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 ctgtaaagctcaggagggatagcaccgtga 35
|||| |||||||||||||||||| ||||||
Sbjct: 1 ctgttaagctcaggagggatagcgccgtga 30
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 atctgtaaagctcaggagggatagc 28
|||||| ||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagc 28
>40073_ath-MIR390b:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 taaagctcaggagggatagc 28
||||||||||||||||||||
Sbjct: 13 taaagctcaggagggatagc 32
>39863_aly-MIR390b:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 9 taaagctcaggagggatagc 28
||||||||||||||||||||
Sbjct: 17 taaagctcaggagggatagc 36
