miRNEST 2.0, an integrative microRNA resource :: BLAST
>40476_gma-MIR396d:mirbase
Length = 108
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaacttcttatgc 48
||||||||||||||||||||||||||||||||||
Sbjct: 5 atgcttttccacagctttcttgaacttcttatgc 38
>40474_gma-MIR396b:mirbase
Length = 126
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaacttcttatgc 48
||||||||||||||||||||||||||||||||||
Sbjct: 15 atgcttttccacagctttcttgaacttcttatgc 48
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 5 aagtcctgttatgcttttccacagctttcttgaacttct 43
||||||||| |||||||||||| ||||||||||||||||
Sbjct: 140 aagtcctgtcatgcttttccacggctttcttgaacttct 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaacttct 43
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttct 43
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaacttctt 44
||||||||||||||||||||||||||||||
Sbjct: 8 atgcttttccacagctttcttgaacttctt 37
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 ccacagctttcttgaacttc 42
||||||||||||||||||||
Sbjct: 95 ccacagctttcttgaacttc 76
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaacttctt 44
||||||||||||||||||||||||||||||
Sbjct: 5 atgcttttccacagctttcttgaacttctt 34
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 8 tcctgttatgcttttccacagctttcttgaact 40
|||||| ||||||||||||||||||||||||||
Sbjct: 1 tcctgtcatgcttttccacagctttcttgaact 33
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 16 tgcttttccacagctttcttgaacttctt 44
|||||||||||||||||||||||||||||
Sbjct: 1 tgcttttccacagctttcttgaacttctt 29
>40379_rco-MIR396:mirbase
Length = 124
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 16 tgcttttccacagctttcttgaacttctt 44
|||||||||||||||||||||||||||||
Sbjct: 1 tgcttttccacagctttcttgaacttctt 29
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaacttc 42
||||||||||||||||||||||||||||
Sbjct: 5 atgcttttccacagctttcttgaacttc 32
>41243_csi-MIR396c:mirbase
Length = 178
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 9 cctgttatgcttttccacagctttcttgaacttctt 44
||||| ||| ||||||||||||||||||||||||||
Sbjct: 1 cctgtcatgtttttccacagctttcttgaacttctt 36
>41212_ccl-MIR396:mirbase
Length = 277
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaacttc 42
||||||||||||||||||||||||||||
Sbjct: 137 atgcttttccacagctttcttgaacttc 164
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaactt 41
|||||||||||||||||||||||||||
Sbjct: 15 atgcttttccacagctttcttgaactt 41
>42812_zma-MIR396f:mirbase
Length = 117
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaacttctt 44
|||||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaacttctt 25
>42811_zma-MIR396e:mirbase
Length = 166
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaacttctt 44
|||||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaacttctt 25
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaacttct 43
|||| ||||||||||||||||||||||||
Sbjct: 15 atgcctttccacagctttcttgaacttct 43
>42028_osa-MIR396c:mirbase
Length = 141
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaacttct 43
|||| ||||||||||||||||||||||||
Sbjct: 5 atgcctttccacagctttcttgaacttct 33
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 ttttccacagctttcttgaacttc 42
||||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaacttc 32
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 15 atgcttttccacagctttcttgaacttctta 45
||||| |||||| ||||||||||||||||||
Sbjct: 100 atgctattccacggctttcttgaacttctta 70
>40086_ath-MIR396b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 cttttccacagctttcttgaactt 41
||||||||||||||||||||||||
Sbjct: 8 cttttccacagctttcttgaactt 31
>39426_pta-MIR396:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 cttttccacagctttcttgaactt 41
||||||||||||||||||||||||
Sbjct: 14 cttttccacagctttcttgaactt 37
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 tttccacagctttcttgaacttc 42
|||||||||||||||||||||||
Sbjct: 31 tttccacagctttcttgaacttc 53
>41441_ptc-MIR396g:mirbase
Length = 168
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaactt 41
|||||||||||| ||||||||||||||
Sbjct: 5 atgcttttccacggctttcttgaactt 31
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaactt 41
|||||||||||| ||||||||||||||
Sbjct: 15 atgcttttccacggctttcttgaactt 41
>39878_aly-MIR396b:mirbase
Length = 188
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttttccacagctttcttgaactt 41
|||||||||||||||||||||||
Sbjct: 30 ttttccacagctttcttgaactt 52
>41242_csi-MIR396b:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 ttttccacagctttcttgaact 40
||||||||||||||||||||||
Sbjct: 18 ttttccacagctttcttgaact 39
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaacttcttat 46
||||||||||||||||||||| ||||
Sbjct: 1 ttccacagctttcttgaactttttat 26
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 ttttccacagctttcttgaact 40
||||||||||||||||||||||
Sbjct: 19 ttttccacagctttcttgaact 40
>39379_pab-MIR396a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaact 40
||||| ||||||||||||||||||||
Sbjct: 10 atgctcttccacagctttcttgaact 35
>40296_bna-MIR396a:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactt 41
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>39741_smo-MIR396:mirbase
Length = 168
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 atgcttttccacagctttcttgaac 39
|||||||||||| ||||||||||||
Sbjct: 5 atgcttttccacggctttcttgaac 29
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 ccacagctttcttgaacttc 42
||||||||||||||||||||
Sbjct: 153 ccacagctttcttgaacttc 134
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41241_csi-MIR396a:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 19 ttttccacagctttcttgaa 38
||||||||||||||||||||
Sbjct: 109 ttttccacagctttcttgaa 90
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaact 26
>40473_gma-MIR396a:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40085_ath-MIR396a:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43
>39381_pab-MIR396c:mirbase
Length = 143
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 19 ttttccacagctttcttgaacttc 42
|||||||| |||||||||||||||
Sbjct: 23 ttttccacggctttcttgaacttc 46
