miRNEST 2.0, an integrative microRNA resource :: BLAST
>40479_gma-MIR398b:mirbase
Length = 135
Score = 176 bits (89), Expect = 2e-45
Identities = 109/115 (94%), Gaps = 3/115 (2%)
Strand = Plus / Plus
Query: 5 gaggagtgaatctgagaacacaaggctggtttgcactgctatatcat---ctattggtat 61
|||||||| ||||||||||||||||||||||||||||||||||| || | ||||||||
Sbjct: 21 gaggagtggatctgagaacacaaggctggtttgcactgctatattatgatcgattggtat 80
Query: 62 aaggtgaatttactttgtgttctcaggtcacccctttgagccaacctgttgacat 116
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 aaggtgaatttactttgtgttctcaggtcacccctttgagccaacctgttgacat 135
>40403_ahy-MIR398:mirbase
Length = 153
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 68 aatttactttgtgttctcaggtcacccctttgag 101
||||||| ||||||||||||||||||||||||||
Sbjct: 120 aatttaccttgtgttctcaggtcacccctttgag 153
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 68 aatttactttgtgttctcaggt 89
||||||||||||||||||||||
Sbjct: 38 aatttactttgtgttctcaggt 17
>40728_mtr-MIR398a:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgtgttctcaggtcacccctttgag 101
|||||||||||||||||||||||||||
Sbjct: 71 tttgtgttctcaggtcacccctttgag 97
>40089_ath-MIR398a:mirbase
Length = 105
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 tttgtgttctcaggtcacccctttga 100
||||||||||||||||||||||||||
Sbjct: 73 tttgtgttctcaggtcacccctttga 98
>39881_aly-MIR398a:mirbase
Length = 182
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 tttgtgttctcaggtcacccctttga 100
||||||||||||||||||||||||||
Sbjct: 120 tttgtgttctcaggtcacccctttga 145
>41665_vvi-MIR398a:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 tttgtgttctcaggtcacccctttg 99
|||||||||||||||||||||||||
Sbjct: 71 tttgtgttctcaggtcacccctttg 95
>41190_aqc-MIR398a:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 tttgtgttctcaggtcacccctttg 99
|||||||||||||||||||||||||
Sbjct: 64 tttgtgttctcaggtcacccctttg 88
>40308_bol-MIR398a:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttga 100
|||||||||||||||||||||||||
Sbjct: 70 ttgtgttctcaggtcacccctttga 94
>41800_bdi-MIR398b:mirbase
Length = 163
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttg 99
||||||||||||||||||||||||
Sbjct: 100 ttgtgttctcaggtcacccctttg 123
>41245_csi-MIR398:mirbase
Length = 225
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttg 99
||||||||||||||||||||||||
Sbjct: 131 ttgtgttctcaggtcacccctttg 154
>41078_gra-MIR398:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttg 99
||||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctttg 88
>41059_ghr-MIR398:mirbase
Length = 106
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctttg 99
||||||||||||||||||||||||
Sbjct: 65 ttgtgttctcaggtcacccctttg 88
>42039_osa-MIR398a:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccctttg 99
|||||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccctttg 107
>41445_ptc-MIR398a:mirbase
Length = 109
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccctttg 99
|||||||||||||||||||||||
Sbjct: 80 tgtgttctcaggtcacccctttg 102
>40381_rco-MIR398a:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccctttg 99
|||||||||||||||||||||||
Sbjct: 66 tgtgttctcaggtcacccctttg 88
>41145_tcc-MIR398b:mirbase
Length = 165
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 ttgtgttctcaggtcacccctt 97
||||||||||||||||||||||
Sbjct: 124 ttgtgttctcaggtcacccctt 145
>40091_ath-MIR398c:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 85 tgtgttctcaggtcacccct 104
>40090_ath-MIR398b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 86 tgtgttctcaggtcacccct 105
>39882_aly-MIR398b:mirbase
Length = 142
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 77 tgtgttctcaggtcacccct 96
||||||||||||||||||||
Sbjct: 91 tgtgttctcaggtcacccct 110
