miRNEST 2.0, an integrative microRNA resource :: BLAST
>40506_gma-MIR1520e:mirbase
Length = 164
Score = 87.7 bits (44), Expect = 2e-18
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 74 gacatccaatcagaacatgacacgtgacagtcatcatttaataagaacgtgacata 129
|||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 100 gacatccaatcagaacatgacacgtgacagtcgtcatccaataagaacgtgacata 155
Score = 60.0 bits (30), Expect = 4e-10
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 3 tgtcacgttcttattgaatgatgactattacgtgtcatgttctgat 48
|||||||||||||||| |||| |||| | |||||||||||||||||
Sbjct: 153 tgtcacgttcttattggatgacgactgtcacgtgtcatgttctgat 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 79 ccaatcagaacatgacacgtgacagtcatcatttaataagaacgtga 125
||||| |||| |||||| |||||||||||||| ||| |||||||||
Sbjct: 60 ccaattagaatatgacatgtgacagtcatcatccaatcagaacgtga 14
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 76 catccaatcagaacatgacacgtgacagt 104
|||||||||||||| ||| ||||||||||
Sbjct: 31 catccaatcagaacgtgatacgtgacagt 3
>40504_gma-MIR1520c:mirbase
Length = 140
Score = 75.8 bits (38), Expect = 7e-15
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 74 gacatccaatcagaacatgacacgtgacagtcatcatttaataagaacgtgaca 127
||||||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct: 72 gacatccaatcagaacatgacacatgacaaacatcattcaataagaacgtgaca 125
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 1 cgtgtcacgttcttattgaatgatgactattacgtgtcatgttctgat 48
||||||||||||||||||||||||| | | | |||||||||||||||
Sbjct: 127 cgtgtcacgttcttattgaatgatgtttgtcatgtgtcatgttctgat 80
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 80 caatcagaacatgacacgtgacagtcatcat 110
||||||||| |||||||||||||||||||||
Sbjct: 31 caatcagaatatgacacgtgacagtcatcat 1
>40510_gma-MIR1520i:mirbase
Length = 144
Score = 73.8 bits (37), Expect = 3e-14
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 79 ccaatcagaacatgacacgtgacagtcatcatttaataagaacgtgaca 127
||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 66 ccaatcagaacatgacacgtgacagtcataatccaataagaacgtgaca 18
Score = 65.9 bits (33), Expect = 7e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 1 cgtgtcacgttcttattgaatgatgactattacgtgtcatgttctgatcgaccaatgaca 60
|||||||||||||||||| || |||||| | ||||||||||||||||| | |||||| |
Sbjct: 16 cgtgtcacgttcttattggattatgactgtcacgtgtcatgttctgattggtcaatgaaa 75
Query: 61 acaacaata 69
| |||||||
Sbjct: 76 ataacaata 84
>40512_gma-MIR1520k:mirbase
Length = 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 74 gacatccaatcagaacatgacacgtgacagtcatca 109
||||||||||||||||||||||| ||||||||||||
Sbjct: 82 gacatccaatcagaacatgacacatgacagtcatca 117
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 81 aatcagaacatgacacgtgacagtcatcatttaataagaa 120
|||||||||||||||||||||| ||||||| ||||||||
Sbjct: 40 aatcagaacatgacacgtgacaatcatcatccaataagaa 1
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 10 ttcttattgaatgatgactattacgtgtcatgttctgat 48
||||||||| ||||||| | | |||||||||||||||||
Sbjct: 1 ttcttattggatgatgattgtcacgtgtcatgttctgat 39
>40511_gma-MIR1520j:mirbase
Length = 176
Score = 63.9 bits (32), Expect = 3e-11
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 77 atccaatcagaacatgacacgtgacagtcatcatttaataagaacgtgacat 128
||||||||| |||||| |||||||| |||||||| ||||||||||||||||
Sbjct: 68 atccaatcataacatggtacgtgacaatcatcattcaataagaacgtgacat 17
Score = 54.0 bits (27), Expect = 3e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 2 gtgtcacgttcttattgaatgatgactattacgtgtcatgttctgat 48
||||||||||||||||| |||||||| || |||||| ||||| ||||
Sbjct: 160 gtgtcacgttcttattggatgatgacgatcacgtgttatgttatgat 114
Score = 50.1 bits (25), Expect = 4e-07
Identities = 43/49 (87%)
Strand = Plus / Plus
Query: 79 ccaatcagaacatgacacgtgacagtcatcatttaataagaacgtgaca 127
||||||| ||||| |||||||| |||||||| |||||||||||||||
Sbjct: 111 ccaatcataacataacacgtgatcgtcatcatccaataagaacgtgaca 159
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 3 tgtcacgttcttattgaatgatga 26
||||||||||||||||||||||||
Sbjct: 18 tgtcacgttcttattgaatgatga 41
>40514_gma-MIR1520m:mirbase
Length = 128
Score = 61.9 bits (31), Expect = 1e-10
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 74 gacatccaatcagaacatgacacgtgacagtcatcatttaataagaa 120
||||||||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 47 gacatccaatcagaacatggcacgtaacagtcatcatccaataagaa 1
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 10 ttcttattgaatgatgactattacgtgtcatgttctgat 48
||||||||| ||||||||| ||||||| |||||||||||
Sbjct: 1 ttcttattggatgatgactgttacgtgccatgttctgat 39
Score = 50.1 bits (25), Expect = 4e-07
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 80 caatcagaacatgacacgtgacagtcatcatttaataagaa 120
|||||||||||||||| |||||| | |||||| ||||||||
Sbjct: 88 caatcagaacatgacatgtgacaattatcattcaataagaa 128
Score = 46.1 bits (23), Expect = 6e-06
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 10 ttcttattgaatgatgactattacgtgtcatgttctgatcgaccaatgacaacaacaat 68
||||||||||||||| | | | || |||||||||||||| || ||||| |||||||||
Sbjct: 128 ttcttattgaatgataattgtcacatgtcatgttctgattgataaatgaaaacaacaat 70
>40513_gma-MIR1520l:mirbase
Length = 110
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 74 gacatccaatcagaacatgacacgtgacagtcatcatt 111
||||| ||||||||||||||||||||| ||||||||||
Sbjct: 73 gacattcaatcagaacatgacacgtgatagtcatcatt 110
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 19 aatgatgactattacgtgtcatgttctgat 48
|||||||||||| |||||||||||||||||
Sbjct: 110 aatgatgactatcacgtgtcatgttctgat 81
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 79 ccaatcagaacatgacacgtgacagtcatcat 110
|||||||||| ||||||||||||| |||||||
Sbjct: 33 ccaatcagaatatgacacgtgacaatcatcat 2
>40507_gma-MIR1520f:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 81 aatcagaacatgacacgtgacagtcatcatttaataagaa 120
|||||||||||||||||||||| || ||||||| ||||||
Sbjct: 40 aatcagaacatgacacgtgacaatcgtcatttagtaagaa 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 79 ccaatcagaacatgacacgtgaca 102
|||||||||||||||||| |||||
Sbjct: 76 ccaatcagaacatgacacatgaca 99
>40505_gma-MIR1520d:mirbase
Length = 111
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 75 acatccaatcagaacatgacacgtgacagtcatcat 110
||||||||||||||||||||| |||| |||||||||
Sbjct: 36 acatccaatcagaacatgacatgtgatagtcatcat 1
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 32 acgtgtcatgttctgatcgaccaatgacaacaacaat 68
||||||||||||||||| || |||||| |||||||||
Sbjct: 96 acgtgtcatgttctgattgatcaatgaaaacaacaat 60
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 80 caatcagaacatgacacgtgaca 102
|||||||||||||||||||||||
Sbjct: 78 caatcagaacatgacacgtgaca 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 20 atgatgactattacgtgtcatgttctgat 48
||||||||||| || ||||||||||||||
Sbjct: 1 atgatgactatcacatgtcatgttctgat 29
>40508_gma-MIR1520g:mirbase
Length = 108
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 80 caatcagaacatgacacgtgacagtcatcat 110
|||| ||||||||||||||||||||||||||
Sbjct: 31 caattagaacatgacacgtgacagtcatcat 1
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 80 caatcagaacatgacacgtgacagtcatcat 110
||||||||||||||||||||||| |||||||
Sbjct: 78 caatcagaacatgacacgtgacaatcatcat 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 32 acgtgtcatgttctgatcgaccaatgacaacaa 64
||||||||||||||||| || |||||| |||||
Sbjct: 96 acgtgtcatgttctgattgatcaatgataacaa 64
>40517_gma-MIR1520p:mirbase
Length = 139
Score = 52.0 bits (26), Expect = 1e-07
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 79 ccaatcagaacatgacacgtgacagtcatcatttaataagaacgtgacat 128
||||||| ||||| ||| |||||||||||||| ||||| ||||||||||
Sbjct: 88 ccaatcaaaacataacatgtgacagtcatcatccaataacaacgtgacat 137
>40515_gma-MIR1520n:mirbase
Length = 96
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 80 caatcagaacatgacacgtgacagt 104
|||||||||||||||||||||||||
Sbjct: 72 caatcagaacatgacacgtgacagt 96
>40502_gma-MIR1520a:mirbase
Length = 150
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 74 gacatccaatcagaacatgacacgtgacagtcatcat 110
|||||||||| ||||||||| || |||||||||||||
Sbjct: 108 gacatccaattagaacatgatacatgacagtcatcat 144
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/47 (89%), Gaps = 2/47 (4%)
Strand = Plus / Plus
Query: 2 gtgtcacgttcttattgaatgatgactattacgtgtcatgttctgat 48
|||||| |||||||||| ||||||||| || |||||||||||||||
Sbjct: 21 gtgtcatgttcttattggatgatgactgtt--gtgtcatgttctgat 65
Score = 44.1 bits (22), Expect = 2e-05
Identities = 43/49 (87%), Gaps = 2/49 (4%)
Strand = Plus / Minus
Query: 79 ccaatcagaacatgacacgtgacagtcatcatttaataagaacgtgaca 127
|||||||||||||||||| ||||||||||| ||||||||| |||||
Sbjct: 68 ccaatcagaacatgacac--aacagtcatcatccaataagaacatgaca 22
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 76 catccaatcagaacatgacacgtgacagtcatcatt 111
|||||||| |||||||||||| |||| |||| ||||
Sbjct: 41 catccaataagaacatgacacatgacggtcaacatt 6
>40518_gma-MIR1520q:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 79 ccaatcagaacatgacacgtgaca 102
|||||||||||||||||| |||||
Sbjct: 91 ccaatcagaacatgacacatgaca 114
