miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41623_vvi-MIR171b:mirbase
          Length = 99

 Score = 54.0 bits (27), Expect = 2e-08
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                 
Query: 52 atatcagccatgtagtttgattgagccgcgtcaatatct 90
          |||| ||||||||  ||||||||||||||||||||||||
Sbjct: 52 atattagccatgtgatttgattgagccgcgtcaatatct 90



 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                          
Query: 5  aggtattggcgcgcctcaatttgaatacatgg 36
          ||||||||||| |||||||||| || ||||||
Sbjct: 8  aggtattggcgtgcctcaatttaaagacatgg 39




>41281_ctr-MIR171:mirbase
          Length = 371

 Score = 52.0 bits (26), Expect = 7e-08
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 57  agccatgtagtttgattgagccgcgtcaatatct 90
           ||||||||| ||| ||||||||||||||||||||
Sbjct: 89  agccatgtattttcattgagccgcgtcaatatct 122



 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 3  caaggtattggcgcgcctcaattt 26
          ||||||||||||||||||||||||
Sbjct: 39 caaggtattggcgcgcctcaattt 62




>41116_tcc-MIR171a:mirbase
          Length = 119

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 66  gtttgattgagccgcgtcaatatcttgt 93
           |||||||||||||||| |||||||||||
Sbjct: 76  gtttgattgagccgcgccaatatcttgt 103




>42773_zma-MIR171m:mirbase
          Length = 82

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 56 cagccatgtagtttgattgagccgcgtcaatatct 90
          |||||||||  || |||||||||||||||||||||
Sbjct: 48 cagccatgttcttggattgagccgcgtcaatatct 82




>42772_zma-MIR171l:mirbase
          Length = 78

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 56 cagccatgtagtttgattgagccgcgtcaatatct 90
          |||||||||  || |||||||||||||||||||||
Sbjct: 44 cagccatgttcttggattgagccgcgtcaatatct 78




>42553_sbi-MIR171h:mirbase
          Length = 81

 Score = 46.1 bits (23), Expect = 4e-06
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 56 cagccatgtagtttgattgagccgcgtcaatatct 90
          |||||||||  || |||||||||||||||||||||
Sbjct: 46 cagccatgttcttggattgagccgcgtcaatatct 80




>41989_osa-MIR171i:mirbase
          Length = 120

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 70  gattgagccgcgtcaatatct 90
           |||||||||||||||||||||
Sbjct: 89  gattgagccgcgtcaatatct 109