miRNEST 2.0, an integrative microRNA resource :: BLAST
>40465_gma-MIR319b:mirbase
Length = 208
Score = 222 bits (112), Expect = 7e-59
Identities = 164/179 (91%), Gaps = 3/179 (1%)
Strand = Plus / Plus
Query: 1 taagagagctttctttagtccactcatgggtgacaataagatttcaattagctgctgact 60
||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 18 taagagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgact 77
Query: 61 cattcatccaaatgttgagtaaaatatatagaaacatatactcatcaaatgagtgaatga 120
|||||||||||||| ||||| ||| | ||||| ||| |||| |||||||||||||||
Sbjct: 78 cattcatccaaatgctgagtgaaagcga-agaaagata--ctcagcaaatgagtgaatga 134
Query: 121 tgcgggagacaaattgaatcttaagtttcctatacttggactgaagggagctccctttt 179
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 135 tgcgggagacaaattgattcttaagtttcctgtacttggactgaagggagctccctttt 193
>40464_gma-MIR319a:mirbase
Length = 207
Score = 210 bits (106), Expect = 3e-55
Identities = 163/180 (90%), Gaps = 4/180 (2%)
Strand = Plus / Plus
Query: 1 taagagagctttctttagtccactcatgggtgacaataagatttcaattagctgctgact 60
||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||
Sbjct: 18 taagagagctttcttcagtccactcatgggtgacagtaagatt-caattagctgccgact 76
Query: 61 cattcatccaaatgttgagtaaaatatatagaaacatatactcatcaaatgagtgaatga 120
|||||||||||||||||||| || | | | ||||||||| || ||||||||||||
Sbjct: 77 cattcatccaaatgttgagtgtaagcga---ataaatatactcagcagatgagtgaatga 133
Query: 121 tgcgggagacaaattgaatcttaagtttcctatacttggactgaagggagctcccttttc 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 134 tgcgggagacaaattgaatcttaagtttcctgtacttggactgaagggagctcccttttc 193
>41282_ctr-MIR319:mirbase
Length = 186
Score = 133 bits (67), Expect = 5e-32
Identities = 146/170 (85%), Gaps = 3/170 (1%)
Strand = Plus / Plus
Query: 6 gagctttctttagtccactcatgggtgacaataagatttcaattagctgctgactcattc 65
|||||||||| ||||||| ||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 10 gagctttcttcggtccacttatgggtggcaataggattt-aattagctgctgactcattc 68
Query: 66 atccaaatgttgagtaaaatatatagaaacatatactcatcaaatgagtgaatgatgcgg 125
|||||||| | |||||| | |||| |||| || |||||||||||||||||||
Sbjct: 69 atccaaatacttagtaaagggtc--gaaatggatacccagtaaatgagtgaatgatgcgg 126
Query: 126 gagacaaattgaatcttaagtttcctatacttggactgaagggagctccc 175
|||||||||||||||||||| ||||| | |||||||||||||||||||||
Sbjct: 127 gagacaaattgaatcttaagcttcctgtgcttggactgaagggagctccc 176
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 131 bits (66), Expect = 2e-31
Identities = 153/178 (85%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 1 taagagagctttctttagtccactcatgggtgacaataagatttcaattagctgctgact 60
||||||||||||||| |||||||||||||||| | || ||||| |||||||||| ||||
Sbjct: 8 taagagagctttcttcagtccactcatgggtggtagtaggattt-aattagctgccgact 66
Query: 61 cattcatccaaatgttgagtaaaatatatagaaacatatactcatcaaatgagtgaatga 120
||||||||||||| ||||| ||| || | || ||| || ||||||||||||||
Sbjct: 67 cattcatccaaatactgagttaaaggacaaggag-at-tacccagtaaatgagtgaatga 124
Query: 121 tgcgggagacaaattgaatcttaagtttcctatacttggactgaagggagctcccttt 178
|||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||
Sbjct: 125 tgcgggagacaaattgaatcctaagcttcctgtacttggactgaagggagctcccttt 182
>40367_rco-MIR319a:mirbase
Length = 211
Score = 127 bits (64), Expect = 3e-30
Identities = 70/72 (97%)
Strand = Plus / Plus
Query: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 137 aaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggactgaag 196
Query: 167 ggagctcccttt 178
||||||||||||
Sbjct: 197 ggagctcccttt 208
Score = 81.8 bits (41), Expect = 2e-16
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Plus
Query: 1 taagagagctttctttagtccactcatgggtgacaataagatttcaattagctgctgact 60
||||||||||||||| |||||||||||||||| | || ||||| |||||||||| ||||
Sbjct: 2 taagagagctttcttcagtccactcatgggtggcggtaggattt-aattagctgccgact 60
Query: 61 cattcatccaaat 73
|||||||||||||
Sbjct: 61 cattcatccaaat 73
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 93.7 bits (47), Expect = 4e-20
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166
|||||| ||||||||||||||||||||||| |||||||| | ||| | ||||||||||||
Sbjct: 102 aaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggactgaag 161
Query: 167 ggagctccctt 177
|||||||||||
Sbjct: 162 ggagctccctt 172
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 87.7 bits (44), Expect = 3e-18
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166
|||||| ||| |||||||||||||||||| |||||||| ||||||| |||||||||||
Sbjct: 108 aaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggactgaag 167
Query: 167 ggagctcccttt 178
||||||||||||
Sbjct: 168 ggagctcccttt 179
>40070_ath-MIR319b:mirbase
Length = 172
Score = 75.8 bits (38), Expect = 1e-14
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166
|||||| ||||||||||| |||||||||||| |||| | || |||| ||||||||||||
Sbjct: 103 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 162
Query: 167 ggagctccct 176
||||||||||
Sbjct: 163 ggagctccct 172
>39859_aly-MIR319b:mirbase
Length = 246
Score = 75.8 bits (38), Expect = 1e-14
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166
|||||| ||||||||||| |||||||||||| |||| | || |||| ||||||||||||
Sbjct: 142 aaatgaatgaatgatgcgagagacaaattgagtcttcacttctctatgcttggactgaag 201
Query: 167 ggagctccct 176
||||||||||
Sbjct: 202 ggagctccct 211
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 aagagagctttctttagtccactcatgg 29
|||||||||||||| ||||||||||||
Sbjct: 39 aagagagctttcttcggtccactcatgg 66
>41544_sly-MIR319:mirbase
Length = 168
Score = 69.9 bits (35), Expect = 6e-13
Identities = 66/75 (88%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 101 ctcatcaaatgagtgaatgatgcgggag-acaaattgaatcttaagtttcctatacttgg 159
|||| ||| ||||||||||| ||||||| |||| |||| |||| || ||||| |||||||
Sbjct: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
Query: 160 actgaagggagctcc 174
|||||||||||||||
Sbjct: 154 actgaagggagctcc 168
Score = 58.0 bits (29), Expect = 2e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 43 ttcaattagctgctgactcattcatccaaatgttgag 79
||||||| ||||| |||||||||||||||||||||||
Sbjct: 36 ttcaatttgctgccgactcattcatccaaatgttgag 72
>41185_aqc-MIR319:mirbase
Length = 177
Score = 67.9 bits (34), Expect = 2e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 107 aaatgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaag 166
|||||| |||||||| ||||||| ||||| |||||| | ||| | ||||||||||||||
Sbjct: 106 aaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactgaag 165
Query: 167 ggagctccct 176
||||||||||
Sbjct: 166 ggagctccct 175
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 43 ttcaattagctgctgactcattcatcca 70
||||||| ||||| ||||||||||||||
Sbjct: 40 ttcaatttgctgccgactcattcatcca 67
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 1 taagagagctttctttagtccactcatgg 29
||||||||||||||| |||||||||||||
Sbjct: 8 taagagagctttcttcagtccactcatgg 36
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctcccttt 178
||||||||||||||||||||||||
Sbjct: 167 cttggactgaagggagctcccttt 190
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 108 aatgagtgaatgatgcgggagacaaatt 135
|||| ||||||||||||||||| |||||
Sbjct: 119 aatgtgtgaatgatgcgggagataaatt 146
>40703_mtr-MIR319:mirbase
Length = 207
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctccctttt 179
|||||||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctccctttt 192
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 2 aagagagctttctttagtccactcatgg 29
|||||||||| ||| |||||||||||||
Sbjct: 18 aagagagcttccttcagtccactcatgg 45
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctcccttt 178
||||||||||||||||||||||||
Sbjct: 164 cttggactgaagggagctcccttt 187
>40369_rco-MIR319c:mirbase
Length = 188
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctcccttt 178
||||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcccttt 185
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 taagagagctttctttagtccactcatggg 30
|||||||||| |||| ||||||||||||||
Sbjct: 2 taagagagctctcttcagtccactcatggg 31
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 108 aatgagtgaatgatgcgggagacaaatt 135
|||| ||||||||||||||||| |||||
Sbjct: 114 aatgtgtgaatgatgcgggagataaatt 141
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctccctt 177
|||||||||||||||||||||||
Sbjct: 161 cttggactgaagggagctccctt 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 1 taagagagctttctttagtccactcatgg 29
||||||||||| ||| |||||||||||||
Sbjct: 8 taagagagcttccttcagtccactcatgg 36
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctccctt 177
|||||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccctt 184
>40069_ath-MIR319a:mirbase
Length = 176
Score = 46.1 bits (23), Expect = 9e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 43 ttcaattagctgctgactcattcatccaaat 73
||||||||||| | |||||||||||||||||
Sbjct: 42 ttcaattagcttccgactcattcatccaaat 72
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 107 aaatgagtgaatgatgcgggagacaaattg 136
|||||| |||||||||||| ||||||||||
Sbjct: 105 aaatgaatgaatgatgcggtagacaaattg 134
>39740_smo-MIR319:mirbase
Length = 215
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctccctt 177
|||||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccctt 207
>42642_tae-MIR319:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctccct 176
||||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctccct 204
>41770_bdi-MIR319:mirbase
Length = 280
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctccct 176
||||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctccct 246
>40368_rco-MIR319b:mirbase
Length = 179
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctccct 176
||||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccct 174
>39858_aly-MIR319a:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 107 aaatgagtgaatgatgcgggagacaaattg 136
|||||| |||||||||||| ||||||||||
Sbjct: 128 aaatgaatgaatgatgcggtagacaaattg 157
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 45 caattagctgctgactcattcatccaaat 73
||||||||| | |||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctccc 175
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctccc 175
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctccc 175
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>42780_zma-MIR319a:mirbase
Length = 209
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 156 ttggactgaagggagctccctttt 179
||||||||||||| ||||||||||
Sbjct: 171 ttggactgaagggtgctccctttt 194
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 156 ttggactgaagggagctccc 175
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctcc 174
||||||||||||||||||||
Sbjct: 175 cttggactgaagggagctcc 194
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctcc 174
||||||||||||||||||||
Sbjct: 173 cttggactgaagggagctcc 192
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctcc 174
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctcc 174
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 cttggactgaagggagctcc 174
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
