miRNEST 2.0, an integrative microRNA resource :: BLAST
>40470_gma-MIR393:mirbase
Length = 120
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 1 aggcatccaaagggatcgcattgatcccaaatc 33
|||||||||||||||||||||||||||||||||
Sbjct: 6 aggcatccaaagggatcgcattgatcccaaatc 38
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 88 tatttgggatcatgctatccctttggatt 116
|||||||||||||||||||||||||||||
Sbjct: 84 tatttgggatcatgctatccctttggatt 112
>41642_vvi-MIR393b:mirbase
Length = 83
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 aggcatccaaagggatcgcattgatcccaaa 31
|||||||||||||||||||||||||||||||
Sbjct: 6 aggcatccaaagggatcgcattgatcccaaa 36
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 94 ggatcatgctatccctttggattc 117
||||||||||||||||||||||||
Sbjct: 51 ggatcatgctatccctttggattc 74
>41417_ptc-MIR393a:mirbase
Length = 85
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 aggcatccaaagggatcgcattgatcccaa 30
||||||||||||||||||||||||||||||
Sbjct: 6 aggcatccaaagggatcgcattgatcccaa 35
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 89 atttgggatcatgctatccctttggattc 117
|||| ||||||||||||||||||||||||
Sbjct: 52 attttggatcatgctatccctttggattc 80
>41418_ptc-MIR393b:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 aggcatccaaagggatcgcattgatccc 28
||||||||||||||||||||||||||||
Sbjct: 6 aggcatccaaagggatcgcattgatccc 33
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 89 atttgggatcatgctatccctttggattc 117
|||| ||||||||||||||||||||||||
Sbjct: 51 attttggatcatgctatccctttggattc 79
>41132_tcc-MIR393a:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 aggcatccaaagggatcgcattgatcc 27
|||||||||||||||||||||||||||
Sbjct: 16 aggcatccaaagggatcgcattgatcc 42
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 89 atttgggatcatgctatccctttggattc 117
|||| ||||||||||||||||||||||||
Sbjct: 73 attttggatcatgctatccctttggattc 101
>40706_mtr-MIR393:mirbase
Length = 135
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 1 aggcatccaaagggatcgcattgatcc 27
|||||||||||||||||||||||||||
Sbjct: 16 aggcatccaaagggatcgcattgatcc 42
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 91 ttgggatcatgctatccctttggatt 116
|||||||||||| |||||||||||||
Sbjct: 93 ttgggatcatgccatccctttggatt 118
>42566_sbi-MIR393:mirbase
Length = 139
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 gcatccaaagggatcgcattgatcc 27
|||||||||||||||||||||||||
Sbjct: 17 gcatccaaagggatcgcattgatcc 41
>41997_osa-MIR393:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 gcatccaaagggatcgcattgatcc 27
|||||||||||||||||||||||||
Sbjct: 8 gcatccaaagggatcgcattgatcc 32
>41774_bdi-MIR393a:mirbase
Length = 159
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 gcatccaaagggatcgcattgatcc 27
|||||||||||||||||||||||||
Sbjct: 33 gcatccaaagggatcgcattgatcc 57
>39866_aly-MIR393b:mirbase
Length = 169
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 3 gcatccaaagggatcgcattgatcc 27
|||||||||||||||||||||||||
Sbjct: 15 gcatccaaagggatcgcattgatcc 39
>41641_vvi-MIR393a:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatccca 29
||||||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatccca 34
>41238_csi-MIR393:mirbase
Length = 145
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 atccaaagggatcgcattgatcc 27
|||||||||||||||||||||||
Sbjct: 20 atccaaagggatcgcattgatcc 42
>40076_ath-MIR393b:mirbase
Length = 160
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 atccaaagggatcgcattgatcc 27
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
>40075_ath-MIR393a:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 atccaaagggatcgcattgatcc 27
|||||||||||||||||||||||
Sbjct: 10 atccaaagggatcgcattgatcc 32
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 94 ggatcatgctatccctttggattcat 119
||||||||||||| ||||||||||||
Sbjct: 103 ggatcatgctatctctttggattcat 128
>39865_aly-MIR393a:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 5 atccaaagggatcgcattgatcc 27
|||||||||||||||||||||||
Sbjct: 17 atccaaagggatcgcattgatcc 39
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 94 ggatcatgctatccctttggattcat 119
||||||||||||| ||||||||||||
Sbjct: 110 ggatcatgctatctctttggattcat 135
>42787_zma-MIR393b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatcc 27
||||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatcc 23
>40295_bna-MIR393:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatcc 27
||||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatcc 22
>42788_zma-MIR393c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 2 tccaaagggatcgcattgatc 22
>42786_zma-MIR393a:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>42567_sbi-MIR393b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 1 tccaaagggatcgcattgatc 21
>41999_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41998_osa-MIR393b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 27 tccaaagggatcgcattgatc 47
>41775_bdi-MIR393b:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 42 tccaaagggatcgcattgatc 62
>41420_ptc-MIR393d:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41419_ptc-MIR393c:mirbase
Length = 107
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>41133_tcc-MIR393b:mirbase
Length = 158
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 21 tccaaagggatcgcattgatc 41
>41054_ghr-MIR393:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 11 tccaaagggatcgcattgatc 31
>40373_rco-MIR393:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 6 tccaaagggatcgcattgatc 26
|||||||||||||||||||||
Sbjct: 6 tccaaagggatcgcattgatc 26
