miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40788_mtr-MIR2587c:mirbase
Length = 110
Score = 218 bits (110), Expect = 6e-58
Identities = 110/110 (100%)
Strand = Plus / Plus
Query: 1 cgatggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgatggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcatttta 60
Query: 61 acttgtgtggggttcatataacggtcaatagagacccttgacataaaaga 110
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acttgtgtggggttcatataacggtcaatagagacccttgacataaaaga 110
>40791_mtr-MIR2587f:mirbase
Length = 105
Score = 125 bits (63), Expect = 7e-30
Identities = 96/107 (89%), Gaps = 5/107 (4%)
Strand = Plus / Plus
Query: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaact 63
||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgc-----agct 58
Query: 64 tgtgtggggttcatataacggtcaatagagacccttgacataaaaga 110
||||||||||||||||||||||||| |||||| |||||||| |||||
Sbjct: 59 tgtgtggggttcatataacggtcaacagagactcttgacatcaaaga 105
>40790_mtr-MIR2587e:mirbase
Length = 105
Score = 125 bits (63), Expect = 7e-30
Identities = 96/107 (89%), Gaps = 5/107 (4%)
Strand = Plus / Plus
Query: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaact 63
||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgc-----agct 58
Query: 64 tgtgtggggttcatataacggtcaatagagacccttgacataaaaga 110
||||||||||||||||||||||||| ||||||| ||||||| |||||
Sbjct: 59 tgtgtggggttcatataacggtcaacagagaccattgacatcaaaga 105
>40789_mtr-MIR2587d:mirbase
Length = 115
Score = 121 bits (61), Expect = 1e-28
Identities = 94/105 (89%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaact 63
||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgc-----agct 58
Query: 64 tgtgtggggttcatataacggtcaatagagacccttgacataaaa 108
||||||||||||||||||||||||| | ||||| |||||||||||
Sbjct: 59 tgtgtggggttcatataacggtcaacatagaccattgacataaaa 103
>40787_mtr-MIR2587b:mirbase
Length = 98
Score = 111 bits (56), Expect = 1e-25
Identities = 89/100 (89%), Gaps = 5/100 (5%)
Strand = Plus / Plus
Query: 5 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaactt 64
|||||||||||||||||||||||||||||||||||||||||| || ||| |||||
Sbjct: 2 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaataacattgc-----aactt 56
Query: 65 gtgtggggttcatataacggtcaatagagacccttgacat 104
|||||||||||||||||||||||| |||||| |||||||
Sbjct: 57 gtgtggggttcatataacggtcaactgagacctttgacat 96
