miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40790_mtr-MIR2587e:mirbase
Length = 105
Score = 161 bits (81), Expect = 1e-40
Identities = 93/97 (95%)
Strand = Plus / Plus
Query: 2 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaataacattgcaacttgtgtg 61
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 5 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtgtg 64
Query: 62 gggttcatataacggtcaactgagacctttgacatca 98
|||||||||||||||||||| |||||| |||||||||
Sbjct: 65 gggttcatataacggtcaacagagaccattgacatca 101
>40791_mtr-MIR2587f:mirbase
Length = 105
Score = 153 bits (77), Expect = 3e-38
Identities = 92/97 (94%)
Strand = Plus / Plus
Query: 2 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaataacattgcaacttgtgtg 61
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 5 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtgtg 64
Query: 62 gggttcatataacggtcaactgagacctttgacatca 98
|||||||||||||||||||| ||||| |||||||||
Sbjct: 65 gggttcatataacggtcaacagagactcttgacatca 101
>40789_mtr-MIR2587d:mirbase
Length = 115
Score = 149 bits (75), Expect = 4e-37
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 2 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaataacattgcaacttgtgtg 61
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 5 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtgtg 64
Query: 62 gggttcatataacggtcaactgagacctttgacat 96
|||||||||||||||||||| ||||| |||||||
Sbjct: 65 gggttcatataacggtcaacatagaccattgacat 99
>40788_mtr-MIR2587c:mirbase
Length = 110
Score = 111 bits (56), Expect = 9e-26
Identities = 89/100 (89%), Gaps = 5/100 (5%)
Strand = Plus / Plus
Query: 2 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaataacattgc-----aactt 56
|||||||||||||||||||||||||||||||||||||||||| || ||| |||||
Sbjct: 5 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaactt 64
Query: 57 gtgtggggttcatataacggtcaactgagacctttgacat 96
|||||||||||||||||||||||| |||||| |||||||
Sbjct: 65 gtgtggggttcatataacggtcaatagagacccttgacat 104
>40786_mtr-MIR2587a:mirbase
Length = 110
Score = 111 bits (56), Expect = 9e-26
Identities = 89/100 (89%), Gaps = 5/100 (5%)
Strand = Plus / Plus
Query: 2 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaataacattgc-----aactt 56
|||||||||||||||||||||||||||||||||||||||||| || ||| |||||
Sbjct: 5 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaactt 64
Query: 57 gtgtggggttcatataacggtcaactgagacctttgacat 96
|||||||||||||||||||||||| |||||| |||||||
Sbjct: 65 gtgtggggttcatataacggtcaatagagacccttgacat 104
