miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40790_mtr-MIR2587e:mirbase
Length = 105
Score = 184 bits (93), Expect = 9e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 3 gtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtg 62
Query: 63 tggggttcatataacggtcaacatagaccattgacat 99
||||||||||||||||||||||| |||||||||||||
Sbjct: 63 tggggttcatataacggtcaacagagaccattgacat 99
>40791_mtr-MIR2587f:mirbase
Length = 105
Score = 168 bits (85), Expect = 6e-43
Identities = 94/97 (96%)
Strand = Plus / Plus
Query: 3 gtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtg 62
Query: 63 tggggttcatataacggtcaacatagaccattgacat 99
||||||||||||||||||||||| |||| |||||||
Sbjct: 63 tggggttcatataacggtcaacagagactcttgacat 99
>40787_mtr-MIR2587b:mirbase
Length = 98
Score = 149 bits (75), Expect = 5e-37
Identities = 90/95 (94%)
Strand = Plus / Plus
Query: 5 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtgtg 64
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 2 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaataacattgcaacttgtgtg 61
Query: 65 gggttcatataacggtcaacatagaccattgacat 99
|||||||||||||||||||| ||||| |||||||
Sbjct: 62 gggttcatataacggtcaactgagacctttgacat 96
>40788_mtr-MIR2587c:mirbase
Length = 110
Score = 121 bits (61), Expect = 1e-28
Identities = 94/105 (89%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgc-----agct 58
||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaact 63
Query: 59 tgtgtggggttcatataacggtcaacatagaccattgacataaaa 103
||||||||||||||||||||||||| | ||||| |||||||||||
Sbjct: 64 tgtgtggggttcatataacggtcaatagagacccttgacataaaa 108
>40786_mtr-MIR2587a:mirbase
Length = 110
Score = 121 bits (61), Expect = 1e-28
Identities = 94/105 (89%), Gaps = 5/105 (4%)
Strand = Plus / Plus
Query: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgc-----agct 58
||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaact 63
Query: 59 tgtgtggggttcatataacggtcaacatagaccattgacataaaa 103
||||||||||||||||||||||||| | ||||| |||||||||||
Sbjct: 64 tgtgtggggttcatataacggtcaatagagacccttgacataaaa 108
