miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40791_mtr-MIR2587f:mirbase
Length = 105
Score = 192 bits (97), Expect = 4e-50
Identities = 103/105 (98%)
Strand = Plus / Plus
Query: 1 cggtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttg 60
Query: 61 tgtggggttcatataacggtcaacagagaccattgacatcaaaga 105
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61 tgtggggttcatataacggtcaacagagactcttgacatcaaaga 105
>40789_mtr-MIR2587d:mirbase
Length = 115
Score = 184 bits (93), Expect = 9e-48
Identities = 96/97 (98%)
Strand = Plus / Plus
Query: 3 gtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtg 62
Query: 63 tggggttcatataacggtcaacagagaccattgacat 99
||||||||||||||||||||||| |||||||||||||
Sbjct: 63 tggggttcatataacggtcaacatagaccattgacat 99
>40787_mtr-MIR2587b:mirbase
Length = 98
Score = 161 bits (81), Expect = 1e-40
Identities = 93/97 (95%)
Strand = Plus / Plus
Query: 5 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgcagcttgtgtg 64
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 2 ggtgtcatggtcattgttgaccgttcatatgaaccctgcaataacattgcaacttgtgtg 61
Query: 65 gggttcatataacggtcaacagagaccattgacatca 101
|||||||||||||||||||| |||||| |||||||||
Sbjct: 62 gggttcatataacggtcaactgagacctttgacatca 98
>40788_mtr-MIR2587c:mirbase
Length = 110
Score = 125 bits (63), Expect = 7e-30
Identities = 96/107 (89%), Gaps = 5/107 (4%)
Strand = Plus / Plus
Query: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgc-----agct 58
||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaact 63
Query: 59 tgtgtggggttcatataacggtcaacagagaccattgacatcaaaga 105
||||||||||||||||||||||||| ||||||| ||||||| |||||
Sbjct: 64 tgtgtggggttcatataacggtcaatagagacccttgacataaaaga 110
>40786_mtr-MIR2587a:mirbase
Length = 110
Score = 125 bits (63), Expect = 7e-30
Identities = 96/107 (89%), Gaps = 5/107 (4%)
Strand = Plus / Plus
Query: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaatagcattgc-----agct 58
||||||||||||||||||||||||||||||||||||||||||| ||| ||| | ||
Sbjct: 4 tggtgtcatggtcattgttgaccgttcatatgaaccctgcaattgcaatgcattttaact 63
Query: 59 tgtgtggggttcatataacggtcaacagagaccattgacatcaaaga 105
||||||||||||||||||||||||| ||||||| ||||||| |||||
Sbjct: 64 tgtgtggggttcatataacggtcaatagagacccttgacataaaaga 110
