miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40800_mtr-MIR2590f:mirbase
Length = 197
Score = 313 bits (158), Expect = 3e-86
Identities = 191/202 (94%), Gaps = 5/202 (2%)
Strand = Plus / Plus
Query: 1 aaaattttaagaatgacatggcagaataatcacccttaaattttatcaataaatagtctt 60
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 1 aaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtctt 60
Query: 61 gaaattaatgttagccaataaaatctcagtctagccggaaatcatggggtggtgggtgtt 120
||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 61 gaaattaatgttagccaataaaatctcag-----ccgaaaatcatagggtggtgggtgtt 115
Query: 121 atgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 175
Query: 181 gccatttcattcttgaatattt 202
||||| ||||||||||||||||
Sbjct: 176 gccatgtcattcttgaatattt 197
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 9 aagaatgacatggcagaataatcacccttaaattt 43
||||||||||||||| |||||||||| ||| ||||
Sbjct: 189 aagaatgacatggcacaataatcacctttagattt 155
>40795_mtr-MIR2590a:mirbase
Length = 197
Score = 313 bits (158), Expect = 3e-86
Identities = 191/202 (94%), Gaps = 5/202 (2%)
Strand = Plus / Plus
Query: 1 aaaattttaagaatgacatggcagaataatcacccttaaattttatcaataaatagtctt 60
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 1 aaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtctt 60
Query: 61 gaaattaatgttagccaataaaatctcagtctagccggaaatcatggggtggtgggtgtt 120
||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 61 gaaattaatgttagccaataaaatctcag-----ccgaaaatcatagggtggtgggtgtt 115
Query: 121 atgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 175
Query: 181 gccatttcattcttgaatattt 202
||||| ||||||||||||||||
Sbjct: 176 gccatgtcattcttgaatattt 197
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 9 aagaatgacatggcagaataatcacccttaaattt 43
||||||||||||||| |||||||||| ||| ||||
Sbjct: 189 aagaatgacatggcacaataatcacctttagattt 155
>40798_mtr-MIR2590d:mirbase
Length = 204
Score = 297 bits (150), Expect = 2e-81
Identities = 188/198 (94%), Gaps = 2/198 (1%)
Strand = Plus / Plus
Query: 1 aaaattttaagaatgacatggcagaataatcacccttaaattttatcaataaatagtctt 60
||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 5 aaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtctt 64
Query: 61 gaaattaatgttagccaataaaatctcagtctagccggaaatcatggggtggtgggtgtt 120
|||| |||||||||||||||||||||||| || | |||||||||| ||||||||||||||
Sbjct: 65 gaaactaatgttagccaataaaatctcagcctggtcggaaatcat-gggtggtgggtgtt 123
Query: 121 atgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 atgtatttttt-tttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 182
Query: 181 gccatttcattcttgaat 198
||||| ||||||||||||
Sbjct: 183 gccatgtcattcttgaat 200
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 160 aaatctaaaggtgattattgtgccatttcattcttgaa 197
|||||||| |||||||||| |||||| |||||||||||
Sbjct: 47 aaatctaagggtgattattctgccatgtcattcttgaa 10
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 9 aagaatgacatggcagaataatcacccttaaattt 43
||||||||||||||| |||||||||| ||| ||||
Sbjct: 196 aagaatgacatggcacaataatcacctttagattt 162
>40796_mtr-MIR2590b:mirbase
Length = 203
Score = 297 bits (150), Expect = 2e-81
Identities = 187/198 (94%), Gaps = 1/198 (0%)
Strand = Plus / Plus
Query: 1 aaaattttaagaatgacatggcagaataatcacccttaaattttatcaataaatagtctt 60
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| || |
Sbjct: 3 aaaatttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatattcat 62
Query: 61 gaaattaatgttagccaataaaatctcagtctagccggaaatcatggggtggtgggtgtt 120
||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 63 gaaattaatgttaaccaataaaatctcagcctgaccggaaatcatggggtggtgggtgtt 122
Query: 121 atgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 180
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 atgtatctttt-tttatgaaagattaataaatgagactgaaatctaaaggtgattattgt 181
Query: 181 gccatttcattcttgaat 198
||||| ||||||||||||
Sbjct: 182 gccatgtcattcttgaat 199
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 9 aagaatgacatggcagaataatcacccttaaattt 43
||||||||||||||| |||||||||| ||| ||||
Sbjct: 195 aagaatgacatggcacaataatcacctttagattt 161
Score = 44.1 bits (22), Expect = 4e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 160 aaatctaaaggtgattattgtgccatttcattcttgaa 197
|||| ||| |||||||||| |||||| |||||||||||
Sbjct: 45 aaatttaagggtgattattctgccatgtcattcttgaa 8
>40799_mtr-MIR2590e:mirbase
Length = 209
Score = 295 bits (149), Expect = 7e-81
Identities = 190/202 (94%), Gaps = 5/202 (2%)
Strand = Plus / Plus
Query: 1 aaaattttaagaatgacatggcagaataatcacccttaaattttatcaataaatagtctt 60
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |
Sbjct: 5 aaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcct 64
Query: 61 gaaattaatgttagccaataaaatctcagtctagccggaaatcatggggtggtgggtgtt 120
|||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||
Sbjct: 65 gaaattaatgttagccaataaaatctcagtctggccggaaatcat-gggtggtgggtgtt 123
Query: 121 atgtattttt----tatttatgaaagattaataaatgagactgaaatctaaaggtgatta 176
|||||||||| | |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 124 atgtattttttttatttttatgaaagattaataaatgagattgaaatctaaaggtgatta 183
Query: 177 ttgtgccatttcattcttgaat 198
||||||||| ||||||||||||
Sbjct: 184 ttgtgccatgtcattcttgaat 205
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 9 aagaatgacatggcagaataatcacccttaaattt 43
||||||||||||||| |||||||||| ||| ||||
Sbjct: 201 aagaatgacatggcacaataatcacctttagattt 167
>40829_mtr-MIR2598:mirbase
Length = 336
Score = 91.7 bits (46), Expect = 2e-19
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 1 aaaattttaagaatgacatggcagaataatcacccttaaattttatcaataaatagtc 58
||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 59 aaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtc 2
Score = 91.7 bits (46), Expect = 2e-19
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 1 aaaattttaagaatgacatggcagaataatcacccttaaattttatcaataaatagtc 58
||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||
Sbjct: 277 aaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtc 334
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 160 aaatctaaaggtgattattgtgccatttcattcttgaa 197
|||||||| |||||||||| |||||| |||||||||||
Sbjct: 17 aaatctaagggtgattattctgccatgtcattcttgaa 54
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 160 aaatctaaaggtgattattgtgccatttcattcttgaa 197
|||||||| |||||||||| |||||| |||||||||||
Sbjct: 319 aaatctaagggtgattattctgccatgtcattcttgaa 282
