miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>40878_mtr-MIR2629f:mirbase
          Length = 87

 Score = 65.9 bits (33), Expect = 2e-11
 Identities = 33/33 (100%)
 Strand = Plus / Plus

                                            
Query: 226 taactgccgaagttttcctcggtagttaactgc 258
           |||||||||||||||||||||||||||||||||
Sbjct: 44  taactgccgaagttttcctcggtagttaactgc 76

>40876_mtr-MIR2629d:mirbase
          Length = 95

 Score = 58.0 bits (29), Expect = 4e-09
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                        
Query: 228 actgccgaagttttcctcggtagttaact 256
           |||||||||||||||||||||||||||||
Sbjct: 12  actgccgaagttttcctcggtagttaact 40

>40877_mtr-MIR2629e:mirbase
          Length = 109

 Score = 52.0 bits (26), Expect = 2e-07
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 234 gaagttttcctcggtagttaactgca 259
           ||||||||||||||||||||||||||
Sbjct: 19  gaagttttcctcggtagttaactgca 44

>40875_mtr-MIR2629c:mirbase
          Length = 61

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 235 aagttttcctcggtagttaactgca 259
           |||||||||||||||||||||||||
Sbjct: 1   aagttttcctcggtagttaactgca 25

>40874_mtr-MIR2629b:mirbase
          Length = 61

 Score = 50.1 bits (25), Expect = 9e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 235 aagttttcctcggtagttaactgca 259
           |||||||||||||||||||||||||
Sbjct: 1   aagttttcctcggtagttaactgca 25

>40873_mtr-MIR2629a:mirbase
          Length = 59

 Score = 48.1 bits (24), Expect = 4e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 236 agttttcctcggtagttaactgca 259
           ||||||||||||||||||||||||
Sbjct: 2   agttttcctcggtagttaactgca 25