miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40908_mtr-MIR2632c:mirbase
Length = 322
Score = 167 bits (84), Expect = 4e-42
Identities = 96/100 (96%)
Strand = Plus / Plus
Query: 5 catttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaat 64
||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 catttgaattttcgtccctgaagttactaatccttccaatatgcccctgcaaatattaat 64
Query: 65 catttgacttttggtcctaattacatctgattagtaactt 104
||||||||||||| || |||||||||||||||||||||||
Sbjct: 65 catttgacttttgatcataattacatctgattagtaactt 104
Score = 125 bits (63), Expect = 1e-29
Identities = 81/87 (93%)
Strand = Plus / Minus
Query: 1 aggtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatat 60
|||||||||||||||| ||||||||||||||||||||| ||||||||||| | ||||||
Sbjct: 321 aggtcatttgaattttagtccctgaagttactaatcctttcaatctgcccccgtaaatat 262
Query: 61 taatcatttgacttttggtcctaatta 87
||||||||||||||||| |||||||||
Sbjct: 261 taatcatttgacttttgctcctaatta 235
Score = 123 bits (62), Expect = 5e-29
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 110 caaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcagcgac 169
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||
Sbjct: 77 caaaagtcaaatgattaatatttgcaggggcatattggaaggattagtaacttcagggac 18
Query: 170 gaaaattcaaatgg 183
||||||||||||||
Sbjct: 17 gaaaattcaaatgg 4
Score = 105 bits (53), Expect = 1e-23
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 103 ttaggaccaaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaactt 162
|||||| ||||||||||||||||||||||| | |||||||||| |||||||||||||||
Sbjct: 238 ttaggagcaaaagtcaaatgattaatatttacgggggcagattgaaaggattagtaactt 297
Query: 163 cagcgacgaaaattcaaatggccta 187
||| ||| |||||||||||| ||||
Sbjct: 298 cagggactaaaattcaaatgaccta 322
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 1 aggtcatttgaattttcatccctgaagttactaatc 36
|||||| ||||||||||||| |||||||||||||||
Sbjct: 128 aggtcacttgaattttcatcactgaagttactaatc 93
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 151 gattagtaacttcagcgacgaaaattcaa 179
||||||||||||||| || ||||||||||
Sbjct: 93 gattagtaacttcagtgatgaaaattcaa 121
>40907_mtr-MIR2632b:mirbase
Length = 194
Score = 163 bits (82), Expect = 6e-41
Identities = 165/191 (86%), Gaps = 15/191 (7%)
Strand = Plus / Plus
Query: 3 gtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatatta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatatta 62
Query: 63 atcatttgacttttggtcctaattacatctga--ttagtaac---------ttaggacca 111
|||||||||||||||| |||| ||| | | | || || ||| |||||
Sbjct: 63 atcatttgacttttgg---taatgacagcccacctcagcaaaaaaacctaattatgacca 119
Query: 112 aaagtcaaatgattaatatttgcaagggcagattggaaggattagtaacttcagcgacga 171
||||| |||||||||||||||||| ||||||||| ||||||||||||||||||| |||||
Sbjct: 120 aaagttaaatgattaatatttgca-gggcagattagaaggattagtaacttcagagacga 178
Query: 172 aaattcaaatg 182
|||||||||||
Sbjct: 179 aaattcaaatg 189
Score = 147 bits (74), Expect = 3e-36
Identities = 159/187 (85%), Gaps = 9/187 (4%)
Strand = Plus / Minus
Query: 4 tcatttgaattttcatccctgaagttactaatccttccaatctgcccctgcaaatattaa 63
|||||||||||||| || ||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 190 tcatttgaattttcgtctctgaagttactaatccttctaatctgccc-tgcaaatattaa 132
Query: 64 tcatttgacttttggtcctaattacatctgattagtaacttagg--------accaaaag 115
|||||| |||||||||| |||||| | | || | | | || ||||||||
Sbjct: 131 tcatttaacttttggtcataattaggtttttttgctgaggtgggctgtcattaccaaaag 72
Query: 116 tcaaatgattaatatttgcaagggcagattggaaggattagtaacttcagcgacgaaaat 175
|||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||
Sbjct: 71 tcaaatgattaatatttgcaggggcagattggaaggattagtaacttcagggatgaaaat 12
Query: 176 tcaaatg 182
|||||||
Sbjct: 11 tcaaatg 5
>40915_mtr-MIR2638b:mirbase
Length = 269
Score = 107 bits (54), Expect = 3e-24
Identities = 72/78 (92%)
Strand = Plus / Plus
Query: 27 gttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatt 86
||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||
Sbjct: 1 gttactaatccttccaatctgccactgcaaatattaatcatttgaaaaatagtcctaatt 60
Query: 87 acatctgattagtaactt 104
||||||||||||||||||
Sbjct: 61 acatctgattagtaactt 78
Score = 103 bits (52), Expect = 5e-23
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 28 ttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 87
||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 269 ttactaatcattccaatctgccactgcaaatattaatcatttgacttttggtcctaatta 210
Score = 89.7 bits (45), Expect = 7e-19
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 103 ttaggaccaaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaa 159
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 213 ttaggaccaaaagtcaaatgattaatatttgcagtggcagattggaatgattagtaa 269
Score = 73.8 bits (37), Expect = 4e-14
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 116 tcaaatgattaatatttgcaagggcagattggaaggattagtaac 160
|||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 45 tcaaatgattaatatttgcagtggcagattggaaggattagtaac 1
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 4 tcatttgaattttcatccctgaagttactaatc 36
|||||||||||||||||||| ||||||||||||
Sbjct: 99 tcatttgaattttcatccctaaagttactaatc 67
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 151 gattagtaacttcagcgacgaaaattcaaatg 182
|||||||||||| || || |||||||||||||
Sbjct: 67 gattagtaactttagggatgaaaattcaaatg 98
>40914_mtr-MIR2638a:mirbase
Length = 269
Score = 105 bits (53), Expect = 1e-23
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 27 gttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatt 86
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttactaatcattccaatctgccactgcaaatattaatcatttgacttttggtcctaatt 60
Query: 87 a 87
|
Sbjct: 61 a 61
Score = 105 bits (53), Expect = 1e-23
Identities = 71/77 (92%)
Strand = Plus / Minus
Query: 28 ttactaatccttccaatctgcccctgcaaatattaatcatttgacttttggtcctaatta 87
|||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||
Sbjct: 269 ttactaatccttccaatctgccactgcaaatattaatcatttgaaaaatagtcctaatta 210
Query: 88 catctgattagtaactt 104
|||||||||||||||||
Sbjct: 209 catctgattagtaactt 193
Score = 91.7 bits (46), Expect = 2e-19
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 103 ttaggaccaaaagtcaaatgattaatatttgcaagggcagattggaaggattagtaac 160
||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 58 ttaggaccaaaagtcaaatgattaatatttgcagtggcagattggaatgattagtaac 1
Score = 71.9 bits (36), Expect = 2e-13
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 116 tcaaatgattaatatttgcaagggcagattggaaggattagtaa 159
|||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 226 tcaaatgattaatatttgcagtggcagattggaaggattagtaa 269
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 4 tcatttgaattttcatccctgaagttactaatc 36
|||||||||||||||||||| ||||||||||||
Sbjct: 172 tcatttgaattttcatccctaaagttactaatc 204
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 151 gattagtaacttcagcgacgaaaattcaaatg 182
|||||||||||| || || |||||||||||||
Sbjct: 204 gattagtaactttagggatgaaaattcaaatg 173
