miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40975_mtr-MIR2659f:mirbase
Length = 205
Score = 345 bits (174), Expect = 8e-96
Identities = 195/202 (96%)
Strand = Plus / Plus
Query: 2 tctacttcaaatcaatggcatcttcaagttctgctggtggttcttcatcaaatatggata 61
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 3 tctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatggata 62
Query: 62 tagatactccagcatatgaaatcaaaggaagaactatgtctattgaggaataggagttaa 121
|||||||||| || ||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 63 tagatactcctgcttatgaaatcaaaggaagaactatgtctattgaggaatgggagctaa 122
Query: 122 tcattcaagcggaaaatccagtggatttcacttctctaactcaccatgggtgcgacttgg 181
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcattcaagcggaaaatcctgtggatttcacttctctaactcaccatgggtgcgacttgg 182
Query: 182 taagattctacaagaagcagaa 203
||||||||||||||||||||||
Sbjct: 183 taagattctacaagaagcagaa 204
>40970_mtr-MIR2659a:mirbase
Length = 205
Score = 345 bits (174), Expect = 8e-96
Identities = 195/202 (96%)
Strand = Plus / Plus
Query: 2 tctacttcaaatcaatggcatcttcaagttctgctggtggttcttcatcaaatatggata 61
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 3 tctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatggata 62
Query: 62 tagatactccagcatatgaaatcaaaggaagaactatgtctattgaggaataggagttaa 121
|||||||||| || ||||||||||||||||||||||||||||||||||||| |||| |||
Sbjct: 63 tagatactcctgcttatgaaatcaaaggaagaactatgtctattgaggaatgggagctaa 122
Query: 122 tcattcaagcggaaaatccagtggatttcacttctctaactcaccatgggtgcgacttgg 181
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcattcaagcggaaaatcctgtggatttcacttctctaactcaccatgggtgcgacttgg 182
Query: 182 taagattctacaagaagcagaa 203
||||||||||||||||||||||
Sbjct: 183 taagattctacaagaagcagaa 204
>40973_mtr-MIR2659d:mirbase
Length = 205
Score = 329 bits (166), Expect = 5e-91
Identities = 193/202 (95%)
Strand = Plus / Plus
Query: 2 tctacttcaaatcaatggcatcttcaagttctgctggtggttcttcatcaaatatggata 61
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 3 tctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatggata 62
Query: 62 tagatactccagcatatgaaatcaaaggaagaactatgtctattgaggaataggagttaa 121
|||||||| | || |||||||||||||||||||||||||| |||||||||| |||| |||
Sbjct: 63 tagatacttctgcttatgaaatcaaaggaagaactatgtcgattgaggaatgggagctaa 122
Query: 122 tcattcaagcggaaaatccagtggatttcacttctctaactcaccatgggtgcgacttgg 181
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 tcattcaagcggaaaatcctgtggatttcacttctctaactcaccatgggtgcgacttgg 182
Query: 182 taagattctacaagaagcagaa 203
||||||||||||||||||||||
Sbjct: 183 taagattctacaagaagcagaa 204
>40972_mtr-MIR2659c:mirbase
Length = 205
Score = 329 bits (166), Expect = 5e-91
Identities = 193/202 (95%)
Strand = Plus / Plus
Query: 2 tctacttcaaatcaatggcatcttcaagttctgctggtggttcttcatcaaatatggata 61
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 3 tctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatggata 62
Query: 62 tagatactccagcatatgaaatcaaaggaagaactatgtctattgaggaataggagttaa 121
|||||||||| || |||||||||||||||||||||||||| |||||||||| ||| |||
Sbjct: 63 tagatactcctgcttatgaaatcaaaggaagaactatgtcgattgaggaatgggaactaa 122
Query: 122 tcattcaagcggaaaatccagtggatttcacttctctaactcaccatgggtgcgacttgg 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 123 tcattcaagcggaaaatccagtggatttcacttctctatctcaccatgggtgcgacttgg 182
Query: 182 taagattctacaagaagcagaa 203
||||||||||||||||||||||
Sbjct: 183 taagattctacaagaagcagaa 204
>40971_mtr-MIR2659b:mirbase
Length = 205
Score = 329 bits (166), Expect = 5e-91
Identities = 193/202 (95%)
Strand = Plus / Plus
Query: 2 tctacttcaaatcaatggcatcttcaagttctgctggtggttcttcatcaaatatggata 61
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct: 3 tctacttcaaatcaatggcatcttcaagttctgccggtggttcttcatcgaatatggata 62
Query: 62 tagatactccagcatatgaaatcaaaggaagaactatgtctattgaggaataggagttaa 121
|||||||||| || |||||||||||||||||||||||||| |||||||||| ||| |||
Sbjct: 63 tagatactcctgcttatgaaatcaaaggaagaactatgtcgattgaggaatgggaactaa 122
Query: 122 tcattcaagcggaaaatccagtggatttcacttctctaactcaccatgggtgcgacttgg 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 123 tcattcaagcggaaaatccagtggatttcacttctctatctcaccatgggtgcgacttgg 182
Query: 182 taagattctacaagaagcagaa 203
||||||||||||||||||||||
Sbjct: 183 taagattctacaagaagcagaa 204
