miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>40782_mtr-MIR2585c:mirbase
Length = 339
Score = 60.0 bits (30), Expect = 4e-10
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 33 aggggtcgtttaaaaattggtccttatatttgttaatcctgacaatttacccct 86
||||||||||||||||||||||| | || | | |||||||| ||||||||||||
Sbjct: 339 aggggtcgtttaaaaattggtccctgtaatcgctaatcctggcaatttacccct 286
>40780_mtr-MIR2585a:mirbase
Length = 346
Score = 58.0 bits (29), Expect = 2e-09
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 28 caattaggggtcgtttaaaaattggtccttatatttgttaatcctgacaatttaccc 84
|||||||||||||||||||||||||||| | || | | |||||||| |||||||||
Sbjct: 346 caattaggggtcgtttaaaaattggtccctgtaatcgctaatcctggtaatttaccc 290
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 29 aattaggggtcgtttaaaaattggtcc 55
|||||||||||||||||||||||||||
Sbjct: 1 aattaggggtcgtttaaaaattggtcc 27
>40781_mtr-MIR2585b:mirbase
Length = 336
Score = 54.0 bits (27), Expect = 2e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 33 aggggtcgtttaaaaattggtccttatatttgttaatcctgacaatt 79
||||||||||||||||||||||| | || | | ||||||||||||||
Sbjct: 336 aggggtcgtttaaaaattggtccctgtaatcgctaatcctgacaatt 290
Score = 42.1 bits (21), Expect = 9e-05
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 32 taggggtcgtttaaaaattggtccttatatttgttaatcct 72
|||||| ||||||||||||||||| | |||| | |||||||
Sbjct: 1 taggggccgtttaaaaattggtccatgtattcgctaatcct 41
>40784_mtr-MIR2585e:mirbase
Length = 368
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 41 tttaaaaattggtccttatatttgttaatcctgacaatttaccc 84
|||||||||| |||| | || | | |||||||||||||||||||
Sbjct: 360 tttaaaaattagtccctgtaatcgctaatcctgacaatttaccc 317
>40783_mtr-MIR2585d:mirbase
Length = 368
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 41 tttaaaaattggtccttatatttgttaatcctgacaatttaccc 84
|||||||||| |||| | || | | |||||||||||||||||||
Sbjct: 360 tttaaaaattagtccctgtaatcgctaatcctgacaatttaccc 317
