miRNEST 2.0, an integrative microRNA resource :: BLAST
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 345 bits (174), Expect = 7e-96
Identities = 174/174 (100%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
Query: 61 gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcccacagttctacccatcagcatgttttgtggtagtcttgtggcttccatatctggg 120
Query: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174
>40432_gma-MIR159a:mirbase
Length = 214
Score = 252 bits (127), Expect = 8e-68
Identities = 165/177 (93%), Gaps = 3/177 (1%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 20 gtggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatg 79
Query: 61 gatcccacagttctacccatcagcatg---ttttgtggtagtcttgtggcttccatatct 117
|||||||||||||||||||||| | | |||||||||||||||||||||||||||| |
Sbjct: 80 gatcccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatattt 139
Query: 118 ggggagcttcatctgcctctatagtatcatccttctttggattgaagggagctctac 174
|||||||||||| ||||| |||||||| | |||||||||||||||||||||||||||
Sbjct: 140 ggggagcttcatttgcctttatagtattaaccttctttggattgaagggagctctac 196
>40435_gma-MIR159d:mirbase
Length = 103
Score = 137 bits (69), Expect = 3e-33
Identities = 95/103 (92%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 36 gggtggattgagctgcttagctatggatcccacagttctacccatcagcatgt---tttg 92
||||| ||||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 1 gggtgaattgagctgcttagctatggatcccacagttctacccatcaataagtgcttttg 60
Query: 93 tggtagtcttgtggcttccatatctggggagcttcatctgcct 135
||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 61 tggtagtcttgtggcttccatatctggggagcttcatttgcct 103
>40338_rco-MIR159:mirbase
Length = 180
Score = 99.6 bits (50), Expect = 7e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||| ||||||||| ||||| |||||||||||| |||||||
Sbjct: 3 gtggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatg 62
Query: 61 gatcccacag 70
||||||||||
Sbjct: 63 gatcccacag 72
>40397_ahy-MIR159:mirbase
Length = 197
Score = 95.6 bits (48), Expect = 1e-20
Identities = 72/80 (90%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
||||||||||||||||||||| |||| |||| ||||| |||||||||||| |||||||
Sbjct: 2 gtggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatg 61
Query: 61 gatcccacagttctacccat 80
||||||||||| ||||||||
Sbjct: 62 gatcccacagtactacccat 81
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 146 atccttctttggattgaagggagctctac 174
|||||| ||||||||||||||||||||||
Sbjct: 150 atccttatttggattgaagggagctctac 178
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 91.7 bits (46), Expect = 2e-19
Identities = 64/70 (91%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||| |||| ||||||||||| |||||||||||| | ||||
Sbjct: 8 gtggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatg 67
Query: 61 gatcccacag 70
||||||||||
Sbjct: 68 gatcccacag 77
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 146 atccttctttggattgaagggagctctac 174
|||||| ||||||||||||||||||||||
Sbjct: 153 atccttgtttggattgaagggagctctac 181
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 81.8 bits (41), Expect = 2e-16
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||| |||| |||| |||||| |||| ||||||| |||||||
Sbjct: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Query: 61 gatcc 65
|||||
Sbjct: 70 gatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 153 tttggattgaagggagctcta 173
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 81.8 bits (41), Expect = 2e-16
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||| |||| |||| |||||| |||| ||||||| |||||||
Sbjct: 10 gtggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatg 69
Query: 61 gatcc 65
|||||
Sbjct: 70 gatcc 74
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 153 tttggattgaagggagctcta 173
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 67.9 bits (34), Expect = 2e-12
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatg 60
|||||||||||||||||||||| || | || | |||||| ||| |||||||| |||||||
Sbjct: 10 gtggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatg 69
Query: 61 gatcccacag 70
|||||||||
Sbjct: 70 aatcccacag 79
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 153 tttggattgaagggagctcta 173
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 65.9 bits (33), Expect = 9e-12
Identities = 109/132 (82%), Gaps = 8/132 (6%)
Strand = Plus / Plus
Query: 45 gagctgcttagctatggatcccacagttctacccatcagcatgtt--ttgtggtagtctt 102
||||||||||||||||| |||| || |||||||||| |||| |||||||||| ||
Sbjct: 48 gagctgcttagctatgggtccctcaactctacccatct---tgttctttgtggtagtttt 104
Query: 103 gtggcttccatatctggggagcttcatctgcctctatagtatcatccttctttggattga 162
||||||||||||||| |||||| | || | || |||| | ||| |||||||||||||
Sbjct: 105 gtggcttccatatctagggagccttat---cacctttagtttaatctttctttggattga 161
Query: 163 agggagctctac 174
||||||||||||
Sbjct: 162 agggagctctac 173
>41218_csi-MIR159:mirbase
Length = 216
Score = 56.0 bits (28), Expect = 9e-09
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 1 gtggagctccttgaagtccaattgaggatcttact-gggtggattgagctgcttagctat 59
||||||||||||||||||||| |||| ||| | |||| ||||||||||| ||||||
Sbjct: 11 gtggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctat 70
Query: 60 ggatcccacagt 71
||||||||||||
Sbjct: 71 ggatcccacagt 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 tttggattgaagggagctctac 174
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
>40311_bra-MIR159a:mirbase
Length = 185
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctctac 174
||||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctctac 184
>40261_bna-MIR159:mirbase
Length = 183
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctctac 174
||||||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctctac 182
>40016_ath-MIR159a:mirbase
Length = 184
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctctac 174
||||||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctctac 184
>39804_aly-MIR159a:mirbase
Length = 222
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctctac 174
||||||||||||||||||||||||||
Sbjct: 179 cttctttggattgaagggagctctac 204
>40017_ath-MIR159b:mirbase
Length = 196
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctct 172
||||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctct 187
>39805_aly-MIR159b:mirbase
Length = 202
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctct 172
||||||||||||||||||||||||
Sbjct: 165 cttctttggattgaagggagctct 188