miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41099_tcc-MIR167b:mirbase
Length = 138
Score = 81.8 bits (41), Expect = 9e-17
Identities = 94/113 (83%), Gaps = 9/113 (7%)
Strand = Plus / Plus
Query: 2 ggaaaaagtgaagctgccagcatgatctatcttccgttagtaaga---------tgcgga 52
||||||||||||||||||||||||||||||||| |||||| || ||| |
Sbjct: 13 ggaaaaagtgaagctgccagcatgatctatctttggttagtgagtgaaagggggtgctaa 72
Query: 53 tgctatattgctaaccctagctaggtcatgctgcgacagcctcactccttcct 105
||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 73 ggctatgttgctaaccctagctaggtcatgctctgacagcctcactccttcct 125
>41340_ptc-MIR167b:mirbase
Length = 96
Score = 75.8 bits (38), Expect = 6e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 63 ctaaccctagctaggtcatgctgcgacagcctcactccttcc 104
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 55 ctaaccctagctaggtcatgctgtgacagcctcactccttcc 96
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 gggaaaaagtgaagctgccagcatgatctatctt 34
||||||||||||||||||||||||||||||||||
Sbjct: 2 gggaaaaagtgaagctgccagcatgatctatctt 35
>40352_rco-MIR167a:mirbase
Length = 130
Score = 69.9 bits (35), Expect = 3e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 61 tgctaaccctagctaggtcatgctgcgacagcctcactccttc 103
|||||||||||||||||||||||| |||||||||||||||||
Sbjct: 88 tgctaaccctagctaggtcatgctctgacagcctcactccttc 130
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatcta 30
||||||||||||||||||||||
Sbjct: 5 gtgaagctgccagcatgatcta 26
>41342_ptc-MIR167d:mirbase
Length = 105
Score = 67.9 bits (34), Expect = 1e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 63 ctaaccctagctaggtcatgctgcgacagcctcactccttcc 104
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 64 ctaaccctagctaggtcatgctctgacagcctcactccttcc 105
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gggaaaaagtgaagctgccagcatgatctatctt 34
||||||| ||||||||||||||||||||||||||
Sbjct: 2 gggaaaaggtgaagctgccagcatgatctatctt 35
>40441_gma-MIR167a:mirbase
Length = 119
Score = 65.9 bits (33), Expect = 5e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 61 tgctaaccctagctaggtcatgctgcgacagcctcactccttcct 105
|||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 65 tgctaaccctgactaggtcatgctgtgacagcctcactccttcct 109
>41594_vvi-MIR167d:mirbase
Length = 115
Score = 63.9 bits (32), Expect = 2e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 62 gctaaccctagctaggtcatgctgcgacagcctcactccttcct 105
|||||||||||||||||||||| |||||||||||||||||||
Sbjct: 69 gctaaccctagctaggtcatgccctgacagcctcactccttcct 112
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 gggaaaaagtgaagctgccagcatgatcta 30
||||| ||||||||||||||||||||||||
Sbjct: 2 gggaataagtgaagctgccagcatgatcta 31
>40444_gma-MIR167d:mirbase
Length = 121
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 gggaaaaagtgaagctgccagcatgatcta 30
||||||||||||||||||||||||||||||
Sbjct: 12 gggaaaaagtgaagctgccagcatgatcta 41
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 61 tgctaaccctagctaggtcatgctgcgacagcctcactccttcct 105
|||||||||| ||||||||||||| | ||||||||||||||||
Sbjct: 67 tgctaaccctcactaggtcatgctgtgctagcctcactccttcct 111
>40040_ath-MIR167b:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gggaaaaagtgaagctgccagcatgatctatctt 34
||||| ||||||||||||||||||||||||||||
Sbjct: 1 gggaacaagtgaagctgccagcatgatctatctt 34
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 65 aaccctagctaggtcatgctgcgacagcctcactccttcct 105
||||| |||||||||||||| |||||||||||||||||||
Sbjct: 69 aacccaagctaggtcatgctctgacagcctcactccttcct 109
>39829_aly-MIR167b:mirbase
Length = 195
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gggaaaaagtgaagctgccagcatgatctatctt 34
||||| ||||||||||||||||||||||||||||
Sbjct: 46 gggaacaagtgaagctgccagcatgatctatctt 79
Score = 58.0 bits (29), Expect = 1e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 65 aaccctagctaggtcatgctgcgacagcctcactccttcct 105
||||| |||||||||||||| |||||||||||||||||||
Sbjct: 114 aacccaagctaggtcatgctctgacagcctcactccttcct 154
>40442_gma-MIR167b:mirbase
Length = 121
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 ggaaaaagtgaagctgccagcatgatcta 30
|||||||||||||||||||||||||||||
Sbjct: 13 ggaaaaagtgaagctgccagcatgatcta 41
Score = 50.1 bits (25), Expect = 3e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 61 tgctaaccctagctaggtcatgctgcgacagcctcactccttcct 105
|||||||||| ||||||||||||| | ||||||||||||||||
Sbjct: 67 tgctaaccctcactaggtcatgctgtgctagcctcactccttcct 111
>40676_mtr-MIR167:mirbase
Length = 320
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 5 aaaagtgaagctgccagcatgatcta 30
||||||||||||||||||||||||||
Sbjct: 1 aaaagtgaagctgccagcatgatcta 26
>41953_osa-MIR167c:mirbase
Length = 163
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 72 gctaggtcatgctgcgacagcctcactccttcc 104
|||||||||||||||| |||||||||| |||||
Sbjct: 119 gctaggtcatgctgcggcagcctcacttcttcc 151
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agtgaagctgccagcatgatcta 30
|||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatcta 37
>41750_bdi-MIR167b:mirbase
Length = 190
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 72 gctaggtcatgctgcgacagcctcactccttcc 104
|||||||||||||||| |||||||||| |||||
Sbjct: 135 gctaggtcatgctgcggcagcctcacttcttcc 167
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agtgaagctgccagcatgatcta 30
|||||||||||||||||||||||
Sbjct: 30 agtgaagctgccagcatgatcta 52
>41749_bdi-MIR167a:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatctatct 33
|||||||||||||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatctatct 34
>42734_zma-MIR167d:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agtgaagctgccagcatgatcta 30
|||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatcta 37
Score = 42.1 bits (21), Expect = 8e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 72 gctaggtcatgctgcgacagcctcactccttcc 104
||||||||||||||| |||||||||| |||||
Sbjct: 89 gctaggtcatgctgctgcagcctcacttcttcc 121
>42733_zma-MIR167c:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agtgaagctgccagcatgatcta 30
|||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatcta 37
>42731_zma-MIR167a:mirbase
Length = 190
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agtgaagctgccagcatgatcta 30
|||||||||||||||||||||||
Sbjct: 15 agtgaagctgccagcatgatcta 37
>42638_tae-MIR167:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agtgaagctgccagcatgatcta 30
|||||||||||||||||||||||
Sbjct: 16 agtgaagctgccagcatgatcta 38
>42527_sbi-MIR167i:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agtgaagctgccagcatgatcta 30
|||||||||||||||||||||||
Sbjct: 1 agtgaagctgccagcatgatcta 23
>41951_osa-MIR167a:mirbase
Length = 141
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 8 agtgaagctgccagcatgatcta 30
|||||||||||||||||||||||
Sbjct: 12 agtgaagctgccagcatgatcta 34
>41339_ptc-MIR167a:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatctatcttcc 36
||||||||||||||||||||| |||||
Sbjct: 11 tgaagctgccagcatgatctaacttcc 37
>42732_zma-MIR167b:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatcta 30
||||||||||||||||||||||
Sbjct: 18 gtgaagctgccagcatgatcta 39
>42639_tae-MIR167b:mirbase
Length = 90
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 8 agtgaagctgccagcatgatctatct 33
|||||||||| |||||||||||||||
Sbjct: 16 agtgaagctgacagcatgatctatct 41
>41952_osa-MIR167b:mirbase
Length = 163
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatcta 30
||||||||||||||||||||||
Sbjct: 17 gtgaagctgccagcatgatcta 38
>42737_zma-MIR167g:mirbase
Length = 243
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatct 29
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>42523_sbi-MIR167e:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatct 29
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>42520_sbi-MIR167b:mirbase
Length = 198
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatcta 21
>42519_sbi-MIR167a:mirbase
Length = 96
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 1 tgaagctgccagcatgatcta 21
Score = 42.1 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 72 gctaggtcatgctgcgacagcctca 96
|||||||||||||||| ||||||||
Sbjct: 72 gctaggtcatgctgcggcagcctca 96
>42469_ssp-MIR167b:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatct 29
|||||||||||||||||||||
Sbjct: 2 gtgaagctgccagcatgatct 22
>42458_sof-MIR167b:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatct 29
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>42457_sof-MIR167a:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatct 29
|||||||||||||||||||||
Sbjct: 20 gtgaagctgccagcatgatct 40
>41958_osa-MIR167h:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatct 29
|||||||||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatct 30
>41957_osa-MIR167g:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 9 gtgaagctgccagcatgatct 29
|||||||||||||||||||||
Sbjct: 10 gtgaagctgccagcatgatct 30
>41595_vvi-MIR167e:mirbase
Length = 90
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>41592_vvi-MIR167b:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>41533_sly-MIR167:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 19 tgaagctgccagcatgatcta 39
>41341_ptc-MIR167c:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 11 tgaagctgccagcatgatcta 31
>41098_tcc-MIR167a:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatcta 41
>40353_rco-MIR167b:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 6 tgaagctgccagcatgatcta 26
>40317_bra-MIR167d:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40316_bra-MIR167c:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40315_bra-MIR167b:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40314_bra-MIR167a:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40270_bna-MIR167c:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40269_bna-MIR167b:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40268_bna-MIR167a:mirbase
Length = 132
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>40039_ath-MIR167a:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 19 tgaagctgccagcatgatcta 39
>39828_aly-MIR167a:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatcta 30
|||||||||||||||||||||
Sbjct: 18 tgaagctgccagcatgatcta 38
>42740_zma-MIR167j:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatct 29
||||||||||||||||||||
Sbjct: 2 tgaagctgccagcatgatct 21
>42739_zma-MIR167i:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatct 29
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
>42738_zma-MIR167h:mirbase
Length = 143
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 10 tgaagctgccagcatgatct 29
||||||||||||||||||||
Sbjct: 21 tgaagctgccagcatgatct 40
