miRNEST 2.0, an integrative microRNA resource :: BLAST
>41561_vvi-MIR156a:mirbase
Length = 104
Score = 117 bits (59), Expect = 2e-27
Identities = 86/94 (91%), Gaps = 2/94 (2%)
Strand = Plus / Plus
Query: 17 atgttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgt 76
||||||||||||||||| ||||||||||| ||||||||||||| | ||||||||||| |
Sbjct: 7 atgttgacagaagagagggagcacaacccagcatcagctaaag--actctttgcttttct 64
Query: 77 tgggagtgtgctttctcttcttctgtcaccatca 110
|||||||||||| ||||||||||||||| |||||
Sbjct: 65 tgggagtgtgctctctcttcttctgtcatcatca 98
>41204_aqc-MIR529:mirbase
Length = 125
Score = 115 bits (58), Expect = 8e-27
Identities = 85/94 (90%)
Strand = Plus / Plus
Query: 17 atgttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttgt 76
||||||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||
Sbjct: 14 atgttgacagaagagagagagcacaacccatcatcagctaaagagagtcttttcttttgt 73
Query: 77 tgggagtgtgctttctcttcttctgtcaccatca 110
|||||||||||| | | |||||||||| |||||
Sbjct: 74 tgggagtgtgctctttgctcttctgtcatcatca 107
>40334_rco-MIR156e:mirbase
Length = 95
Score = 111 bits (56), Expect = 1e-25
Identities = 87/95 (91%), Gaps = 3/95 (3%)
Strand = Plus / Plus
Query: 17 atgttgacagaagagagagagcacaacccggcatca-gctaaagaaagtctttgcttttg 75
|||||||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||
Sbjct: 2 atgttgacagaagagagagagcacaacccggcattaggctaaag--agtctttgcctttg 59
Query: 76 ttgggagtgtgctttctcttcttctgtcaccatca 110
||||||||||||| |||| |||||||||| |||||
Sbjct: 60 ttgggagtgtgctctctcctcttctgtcatcatca 94
>41298_ptc-MIR156k:mirbase
Length = 101
Score = 103 bits (52), Expect = 3e-23
Identities = 83/92 (90%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 16 catgttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttg 75
|||| ||||||||||||| ||||||||||| | | ||||||||| ||||||||||||||
Sbjct: 6 catgctgacagaagagagggagcacaaccctgtaatagctaaagagagtctttgcttttg 65
Query: 76 ttgggagtgtgctttctcttcttctgtcacca 107
|||| | |||||||||||||||||||||||||
Sbjct: 66 ttgg-actgtgctttctcttcttctgtcacca 96
>40430_gma-MIR156f:mirbase
Length = 106
Score = 93.7 bits (47), Expect = 3e-20
Identities = 84/95 (88%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 16 catgttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttg 75
|||||||||||||||||||||||||||||||| | | ||||| | |||||||| ||||
Sbjct: 7 catgttgacagaagagagagagcacaacccgggaatggttaaagga-gtctttgcctttg 65
Query: 76 ttgggagtgtgctttctcttcttctgtcaccatca 110
||||||||||||| ||||||| ||||||| |||||
Sbjct: 66 ttgggagtgtgctctctcttcctctgtcatcatca 100
>40426_gma-MIR156b:mirbase
Length = 120
Score = 93.7 bits (47), Expect = 3e-20
Identities = 84/95 (88%), Gaps = 1/95 (1%)
Strand = Plus / Plus
Query: 16 catgttgacagaagagagagagcacaacccggcatcagctaaagaaagtctttgcttttg 75
|||||||||||||||||||||||||||||||| | ||||||| ||||||||| ||||
Sbjct: 16 catgttgacagaagagagagagcacaacccgggaatggctaaag-gagtctttgcctttg 74
Query: 76 ttgggagtgtgctttctcttcttctgtcaccatca 110
|||||||||||| ||||||| ||||||| |||||
Sbjct: 75 ttgggagtgtgccctctcttcctctgtcatcatca 109
>41914_osa-MIR156k:mirbase
Length = 106
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 21 tgacagaagagagagagcacaacccggcatcagc 54
||||||||||||||||||||||||||||| ||||
Sbjct: 11 tgacagaagagagagagcacaacccggcagcagc 44
>40396_ahy-MIR156c:mirbase
Length = 139
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 17 atgttgacagaagagagagagcacaacccg 46
||||||||||||||||||||||||||||||
Sbjct: 18 atgttgacagaagagagagagcacaacccg 47
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 72 tttgttgggagtgtgctttctcttcttctgtcaccatc 109
||||||||||||||||| ||| |||||||||| ||||
Sbjct: 73 tttgttgggagtgtgctctctactcttctgtcatcatc 110
>40393_ahy-MIR156a:mirbase
Length = 116
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 17 atgttgacagaagagagagagcacaacccg 46
||||||||||||||||||||||||||||||
Sbjct: 14 atgttgacagaagagagagagcacaacccg 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 72 tttgttgggagtgtgctttctcttcttctgtcaccatc 109
||||||||||||||||| ||| |||||||||| ||||
Sbjct: 69 tttgttgggagtgtgctctctactcttctgtcatcatc 106
>39797_aly-MIR156h:mirbase
Length = 99
Score = 58.0 bits (29), Expect = 2e-09
Identities = 82/97 (84%), Gaps = 2/97 (2%)
Strand = Plus / Plus
Query: 17 atgttgacagaagagagagagcacaacccggcatcagc-taaagaaagtctttgcttttg 75
|||||||||||||| ||||||||||||| || || ||| ||||| ||| ||||| |||
Sbjct: 4 atgttgacagaagaaagagagcacaacctgggattagcaaaaagatagt-tttgcccttg 62
Query: 76 ttgggagtgtgctttctcttcttctgtcaccatcatc 112
| ||||||||||| ||| | |||||| ||||||||||
Sbjct: 63 tcgggagtgtgctctctttccttctgccaccatcatc 99
>40009_ath-MIR156h:mirbase
Length = 106
Score = 56.0 bits (28), Expect = 6e-09
Identities = 81/96 (84%), Gaps = 2/96 (2%)
Strand = Plus / Plus
Query: 17 atgttgacagaagagagagagcacaacccggcatcagc-taaagaaagtctttgcttttg 75
|||||||||||||| ||||||||||||| || || ||| ||||| ||| ||||| |||
Sbjct: 8 atgttgacagaagaaagagagcacaacctgggattagcaaaaagatagt-tttgcccttg 66
Query: 76 ttgggagtgtgctttctcttcttctgtcaccatcat 111
| ||||||||||| ||| | |||||| |||||||||
Sbjct: 67 tcgggagtgtgctctctttccttctgccaccatcat 102
>42687_zma-MIR156j:mirbase
Length = 125
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 21 tgacagaagagagagagcacaacccggcatcagc 54
||||||||||||||||||||||||| ||| ||||
Sbjct: 21 tgacagaagagagagagcacaacccagcaccagc 54
>42488_sbi-MIR156d:mirbase
Length = 125
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 21 tgacagaagagagagagcacaacccggcatcagc 54
||||||||||||||||||||||||| ||| ||||
Sbjct: 21 tgacagaagagagagagcacaacccagcaccagc 54
>41867_far-MIR156b:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 gttgacagaagagagagagcaca 41
|||||||||||||||||||||||
Sbjct: 52 gttgacagaagagagagagcaca 74
>41866_far-MIR156a:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 gttgacagaagagagagagcaca 41
|||||||||||||||||||||||
Sbjct: 52 gttgacagaagagagagagcaca 74
>41726_bdi-MIR156:mirbase
Length = 147
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 gttgacagaagagagagagcaca 41
|||||||||||||||||||||||
Sbjct: 99 gttgacagaagagagagagcaca 121
>40427_gma-MIR156c:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcacaacc 44
||||||||||||| |||||||||||||
Sbjct: 144 tgttgacagaagatagagagcacaacc 170
>41877_far-MIR529:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 ttgacagaagagagagagcaca 41
||||||||||||||||||||||
Sbjct: 47 ttgacagaagagagagagcaca 68
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcacaac 43
||||||||||||| ||||||||||||
Sbjct: 9 tgttgacagaagatagagagcacaac 34
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcacaac 43
||||||||||||| ||||||||||||
Sbjct: 19 tgttgacagaagatagagagcacaac 44
>40335_rco-MIR156f:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcacaac 43
||||||||||||| ||||||||||||
Sbjct: 4 tgttgacagaagatagagagcacaac 29
>40648_mtr-MIR156:mirbase
Length = 460
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tgacagaagagagagagcaca 41
|||||||||||||||||||||
Sbjct: 21 tgacagaagagagagagcaca 41
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcacaa 42
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcacaa 42
||||||||||||| |||||||||||
Sbjct: 21 tgttgacagaagatagagagcacaa 45
>41913_osa-MIR156j:mirbase
Length = 165
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
|||||||||||||||| |||||||
Sbjct: 39 tgttgacagaagagagtgagcaca 62
>41911_osa-MIR156h:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
|||||||||||||||| |||||||
Sbjct: 6 tgttgacagaagagagtgagcaca 29
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 9 tgttgacagaagatagagagcaca 32
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>41077_gra-MIR157b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>41076_gra-MIR157a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 3 tgttgacagaagatagagagcaca 26
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40431_gma-MIR156g:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 22 tgttgacagaagatagagagcaca 45
>40428_gma-MIR156d:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 19 tgttgacagaagatagagagcaca 42
>40337_rco-MIR156h:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 4 tgttgacagaagatagagagcaca 27
>40011_ath-MIR157b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 17 tgttgacagaagatagagagcaca 40
>40010_ath-MIR157a:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39799_aly-MIR157b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 2 tgttgacagaagatagagagcaca 25
>39798_aly-MIR157a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 tgttgacagaagagagagagcaca 41
||||||||||||| ||||||||||
Sbjct: 14 tgttgacagaagatagagagcaca 37
>39416_pta-MIR156b:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 21 tgacagaagagagagagcacaacc 44
|||||||||| |||||||||||||
Sbjct: 3 tgacagaagatagagagcacaacc 26