miRNEST 2.0, an integrative microRNA resource :: BLAST
>41574_vvi-MIR160b:mirbase
Length = 104
Score = 119 bits (60), Expect = 5e-28
Identities = 84/92 (91%)
Strand = Plus / Plus
Query: 14 attgttctgcctggctccctgaatgccatctaagaagcttgtcaaagagtgttggctgcc 73
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||
Sbjct: 4 attgttctgcctggctccctgaatgccatctaagaagcttgttaaagagtgttgacaacc 63
Query: 74 ttcttacatggcatgaggggagtcatgcaggc 105
||| || ||||||||||||||||| ||||||
Sbjct: 64 ttcctatttggcatgaggggagtcaagcaggc 95
>40341_rco-MIR160c:mirbase
Length = 94
Score = 109 bits (55), Expect = 5e-25
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctgaatgccatctaagaagcttgtcaaagagtgttggctgccttctt 78
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |
Sbjct: 4 tctgcctggctccctgaatgccatctaagaagcttgtcaaacagtgttggcaattttcct 63
Query: 79 acatggcatgaggggagtcatgcaggc 105
| ||||||||||||||||||||||||
Sbjct: 64 atttggcatgaggggagtcatgcaggc 90
>41310_ptc-MIR160f:mirbase
Length = 100
Score = 103 bits (52), Expect = 3e-23
Identities = 81/88 (92%), Gaps = 2/88 (2%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctgaatgccatctaagaagcttgtcaaagagtgttggctgcct-tct 77
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||
Sbjct: 9 tctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctctct 68
Query: 78 tacatggcatgaggggagtcatgcaggc 105
|| ||||||||||||||||| ||||||
Sbjct: 69 aac-tggcatgaggggagtcacgcaggc 95
>41309_ptc-MIR160e:mirbase
Length = 100
Score = 99.6 bits (50), Expect = 5e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 20 ctgcctggctccctgaatgccatctaagaagcttgtcaaagagtgttggctgccttctta 79
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||
Sbjct: 10 ctgcctggctccctgaatgccatctaggaagcttgtcaaagagtgttggcaacctttcta 69
Query: 80 catggcatgaggggagtc 97
||||||||||||||||
Sbjct: 70 tttggcatgaggggagtc 87
>41573_vvi-MIR160a:mirbase
Length = 103
Score = 79.8 bits (40), Expect = 4e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctgaatgccatctaagaagcttgtcaa 58
||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tctgcctggctccctgaatgccatctaagaagcttgtcaa 48
>40660_mtr-MIR160c:mirbase
Length = 92
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgaatgccatctaagaagcttgtcaaa 59
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 6 tgcctggctccctgaatgccatctgagaagcttgtcaaa 44
>41165_aqc-MIR160a:mirbase
Length = 83
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgaatgccatctaagaagcttgtcaa 58
|||||||||||||| |||||||||||||||||||||||
Sbjct: 1 tgcctggctccctggatgccatctaagaagcttgtcaa 38
>41735_bdi-MIR160e:mirbase
Length = 144
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 20 ctgcctggctccctgaatgccatctaagaagc 51
||||||||||||||||||||||||| ||||||
Sbjct: 30 ctgcctggctccctgaatgccatctgagaagc 61
>40399_ahy-MIR160:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctgaatgccatctaag 47
|||||||||||||||||||||||| ||||
Sbjct: 19 tctgcctggctccctgaatgccatgtaag 47
>40398_ahy-MIR160:mirbase
Length = 126
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctgaatgccatctaag 47
|||||||||||||||||||||||| ||||
Sbjct: 19 tctgcctggctccctgaatgccatgtaag 47
>41928_osa-MIR160f:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ctgcctggctccctgaatgccatc 43
||||||||||||||||||||||||
Sbjct: 10 ctgcctggctccctgaatgccatc 33
>42501_sbi-MIR160f:mirbase
Length = 110
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgaatgccatc 43
|||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgaatgccatc 23
>41311_ptc-MIR160g:mirbase
Length = 98
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctgaatgccatctaagaa 49
|||||||||||||||| |||||| |||||||
Sbjct: 9 tctgcctggctccctggatgccaactaagaa 39
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctgaatgccatct 44
|||||||||||||||| |||||||||
Sbjct: 9 tctgcctggctccctgtatgccatct 34
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctgaatgccatct 44
|||||||||||||||| |||||||||
Sbjct: 18 tctgcctggctccctgtatgccatct 43
>41089_tcc-MIR160c:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctgaatgccatctaag 47
|||||||||||||||| |||||| |||||
Sbjct: 19 tctgcctggctccctggatgccaactaag 47
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgaatgccatctaagaagct 52
|||||||||||||| ||||||| || ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagct 37
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 21 tgcctggctccctgaatgccatctaagaagct 52
|||||||||||||| ||||||| || ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagct 37
>39732_smo-MIR160b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 20 ctgcctggctccctgaatgccatctaagaagc 51
||||||||||||||| |||||| || ||||||
Sbjct: 12 ctgcctggctccctgtatgccacctgagaagc 43
>39461_ppt-MIR160g:mirbase
Length = 138
Score = 40.1 bits (20), Expect = 4e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 20 ctgcctggctccctgaatgccatctaagaagcttgtcaaa 59
|||||||||||| || ||||||||| |||||||| ||||
Sbjct: 29 ctgcctggctccttgtatgccatctgcgaagcttgacaaa 68
