miRNEST 2.0, an integrative microRNA resource :: BLAST
>41311_ptc-MIR160g:mirbase
Length = 98
Score = 75.8 bits (38), Expect = 7e-15
Identities = 77/90 (85%)
Strand = Plus / Plus
Query: 18 atctgcctggctccctggatgccaactaaggatgctgtcgacaaggattggcccttccta 77
|||||||||||||||||||||||||||||| | |||||| | ||| | |||| ||
Sbjct: 8 atctgcctggctccctggatgccaactaagaaatttgtcgagtggtcttgactcttcata 67
Query: 78 gttggcatcagaggagtcaagcaggtccaa 107
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Sbjct: 68 gttggcatcagaggagtcatgcaggtccaa 97
>41573_vvi-MIR160a:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 71 cttcctagttggcatcagaggagtcaagcagg 102
|||||||||||||||||||||||||| |||||
Sbjct: 62 cttcctagttggcatcagaggagtcatgcagg 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 tgatctgcctggctccctggatgccaactaag 47
||||||||||||||||||| |||||| |||||
Sbjct: 6 tgatctgcctggctccctgaatgccatctaag 37
>41165_aqc-MIR160a:mirbase
Length = 83
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 21 tgcctggctccctggatgccaactaag 47
||||||||||||||||||||| |||||
Sbjct: 1 tgcctggctccctggatgccatctaag 27
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 69 cccttcctagttggcatcagaggagtcaagcag 101
||||| |||||||||||||| ||||||| ||||
Sbjct: 50 ccctttctagttggcatcaggggagtcacgcag 82
>40341_rco-MIR160c:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 18 atctgcctggctccctggatgccaactaag 47
||||||||||||||||| |||||| |||||
Sbjct: 3 atctgcctggctccctgaatgccatctaag 32
>41574_vvi-MIR160b:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctggatgccaactaag 47
|||||||||||||||| |||||| |||||
Sbjct: 9 tctgcctggctccctgaatgccatctaag 37
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 70 ccttcctagttggcatcagaggagtcaagcagg 102
|||||||| ||||||| || |||||||||||||
Sbjct: 62 ccttcctatttggcatgaggggagtcaagcagg 94
>41087_tcc-MIR160a:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 19 tctgcctggctccctggatgccaactaag 47
|||||||||||||||| |||||| |||||
Sbjct: 19 tctgcctggctccctgaatgccatctaag 47
>39456_ppt-MIR160b:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 17 gatctgcctggctccctggatgccaact 44
|||| ||||||||||||| |||||||||
Sbjct: 7 gatccgcctggctccctgtatgccaact 34
>39375_pab-MIR160b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 atctgcctggctccctggatgcca 41
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Sbjct: 17 atctgcctggctccctgtatgcca 40
