miRNEST 2.0, an integrative microRNA resource :: BLAST
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 190 bits (96), Expect = 2e-49
Identities = 108/112 (96%)
Strand = Plus / Plus
Query: 13 taaagacactggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataa 72
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 16 taaagacactggaggcagcggttcatcgatctcttcctgagaattttgttgtgagaataa 75
Query: 73 cacaaatacatgattcgatcgataaacctctgcatccagagccttacctctc 124
||||||||||||| ||||||||||||||||||||||||| |||||| |||||
Sbjct: 76 cacaaatacatgaatcgatcgataaacctctgcatccagcgccttaactctc 127
>41220_csi-MIR162:mirbase
Length = 201
Score = 101 bits (51), Expect = 1e-22
Identities = 86/95 (90%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 19 cactggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaa-taacacaa 77
||||||||||||||||||||||||| ||| || ||||||||||||| || ||||||||
Sbjct: 87 cactggaggcagcggttcatcgatcactttgtgcaaattttgttgtgaaaaataacacaa 146
Query: 78 a-tacatgattcgatcgataaacctctgcatccag 111
| ||||||| |||||||||||||||||||||||||
Sbjct: 147 aatacatgaatcgatcgataaacctctgcatccag 181
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 101 bits (51), Expect = 1e-22
Identities = 90/99 (90%), Gaps = 3/99 (3%)
Strand = Plus / Plus
Query: 13 taaagacactggaggcagcggttcatcgatctcttcctgggaattttgttgtgagaataa 72
||||| ||||||||||||||||||||||||||||||||||||| |||| ||||| || |
Sbjct: 5 taaagtcactggaggcagcggttcatcgatctcttcctgggaa-tttggtgtga-aaaat 62
Query: 73 cacaaatacatgattcgatcgataaacctctgcatccag 111
|||| | |||||| |||||||||||||||||||||||||
Sbjct: 63 cacaga-acatgaatcgatcgataaacctctgcatccag 100
>40342_rco-MIR162:mirbase
Length = 101
Score = 85.7 bits (43), Expect = 7e-18
Identities = 84/95 (88%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 19 cactggaggcagcggttcatcgatctcttcctggga-attttgttgtgaga-ataacaca 76
|||||||||||||||||||||||||||||||||| | |||||||||||| | | || |
Sbjct: 2 cactggaggcagcggttcatcgatctcttcctggaagattttgttgtgaaacaaaaataa 61
Query: 77 aatacatgattcgatcgataaacctctgcatccag 111
|| ||||| |||||||||||||||||||||||||
Sbjct: 62 aacgcatgaatcgatcgataaacctctgcatccag 96
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 75.8 bits (38), Expect = 7e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 15 aagacactggaggcagcggttcatcgatctcttcctgg 52
||||||||||||||||||||||||||||||||||||||
Sbjct: 5 aagacactggaggcagcggttcatcgatctcttcctgg 42
>39812_aly-MIR162a:mirbase
Length = 228
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctgggaa 55
|||||||||||||||||||||||||||||||||||
Sbjct: 68 ctggaggcagcggttcatcgatctcttcctgggaa 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 89 gatcgataaacctctgcatccag 111
|||||||||||||||||||||||
Sbjct: 134 gatcgataaacctctgcatccag 156
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 15 aagacactggaggcagcggttcatcgatctcttcctg 51
|||||||||||||||||||||||||||||| ||||||
Sbjct: 5 aagacactggaggcagcggttcatcgatcttttcctg 41
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 15 aagacactggaggcagcggttcatcgatctcttcctg 51
|||||||||||||||||||||||||||||| ||||||
Sbjct: 5 aagacactggaggcagcggttcatcgatcttttcctg 41
>40024_ath-MIR162a:mirbase
Length = 140
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctg 51
|||||||||||||||||||||||||||||||
Sbjct: 25 ctggaggcagcggttcatcgatctcttcctg 55
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 89 gatcgataaacctctgcatccag 111
|||||||||||||||||||||||
Sbjct: 87 gatcgataaacctctgcatccag 109
>41578_vvi-MIR162:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 19 cactggaggcagcggttcatcgatctcttcctg 51
||||||| |||||||||||||||||||||||||
Sbjct: 7 cactggatgcagcggttcatcgatctcttcctg 39
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatccag 111
|||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccag 93
>40437_gma-MIR162:mirbase
Length = 102
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 19 cactggaggcagcggttcatcgatctcttcctg 51
||||||| |||||||||||||||||||||||||
Sbjct: 8 cactggatgcagcggttcatcgatctcttcctg 40
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 catgattcgatcgataaacctctgcatccag 111
||||| |||||||||||||||||||||||||
Sbjct: 63 catgaatcgatcgataaacctctgcatccag 93
>39813_aly-MIR162b:mirbase
Length = 184
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 catgattcgatcgataaacctctgcatccag 111
||||| |||||||||||||||||||||||||
Sbjct: 103 catgaatcgatcgataaacctctgcatccag 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctgggaat 56
||||||||||||||||||||||| |||||| ||||
Sbjct: 50 ctggaggcagcggttcatcgatcaattcctgtgaat 85
>42502_sbi-MIR162:mirbase
Length = 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatccag 111
|||||||||||||||||||||||||
Sbjct: 103 tcgatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatccag 111
|||||||||||||||||||||||||
Sbjct: 139 tcgatcgataaacctctgcatccag 163
>40663_mtr-MIR162:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 19 cactggaggcagcggttcatcgatctcttcctg 51
||||||| |||||||||||||||||| ||||||
Sbjct: 19 cactggatgcagcggttcatcgatctgttcctg 51
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 80 acatgattcgatcgataaacctctgcatccag 111
|||||| ||| |||||||||||||||||||||
Sbjct: 76 acatgaatcggtcgataaacctctgcatccag 107
>40025_ath-MIR162b:mirbase
Length = 111
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatccag 111
|||||||||||||||||||||||||
Sbjct: 75 tcgatcgataaacctctgcatccag 99
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 21 ctggaggcagcggttcatcgatctcttcctgggaat 56
||||||||||||||||||||||| |||||| ||||
Sbjct: 12 ctggaggcagcggttcatcgatcaattcctgtgaat 47
>41736_bdi-MIR162:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatcc 109
|||||||||||||||||||||||
Sbjct: 107 tcgatcgataaacctctgcatcc 129
>41930_osa-MIR162b:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 tcgatcgataaacctctgcatccaga 112
||||||||||| ||||||||||||||
Sbjct: 100 tcgatcgataagcctctgcatccaga 125
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatccag 111
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 tcgataaacctctgcatccag 111
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
