miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41047_ghr-MIR164:mirbase
Length = 101
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 4 gggtgagtagctcttgttggagaagcagggcacgtgcaagt 44
||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2 gggtgagtatctcttgttggagaagcagggcacgtgcaagt 42
Score = 63.9 bits (32), Expect = 3e-11
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 81 agtgaactgtgcacgtgctccccttctccaccatgagttcctca 124
|||||||| ||||||||||||||||||||||| |||||| ||||
Sbjct: 54 agtgaactttgcacgtgctccccttctccaccgtgagtttctca 97
>41091_tcc-MIR164a:mirbase
Length = 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 39/40 (97%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 4 gggtgagtagctc-ttgttggagaagcagggcacgtgcaa 42
||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3 gggtgagtagctccttgttggagaagcagggcacgtgcaa 42
Score = 46.1 bits (23), Expect = 6e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctccaccatgagttcctcaccct 128
||||||||||||||||||||| || | ||||||| ||||
Sbjct: 88 tgcacgtgctccccttctccaacacgggttcctcgccct 126
>40438_gma-MIR164:mirbase
Length = 95
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 16 cttgttggagaagcagggcacgtgcaagtc 45
||||||||||||||||||||||||||||||
Sbjct: 6 cttgttggagaagcagggcacgtgcaagtc 35
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctcca 110
|||||||||||||||||||||
Sbjct: 65 tgcacgtgctccccttctcca 85
>41318_ptc-MIR164c:mirbase
Length = 82
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 tagctcttgttggagaagcagggcacgtgcaag 43
||||||||| |||||||||||||||||||||||
Sbjct: 1 tagctcttgctggagaagcagggcacgtgcaag 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctccaccatg 115
||||||||||||||||||||| ||||
Sbjct: 54 tgcacgtgctccccttctccaacatg 79
>40664_mtr-MIR164a:mirbase
Length = 99
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 16 cttgttggagaagcagggcacgtgcaagtcct 47
||||||||||||||||||||||||||| ||||
Sbjct: 1 cttgttggagaagcagggcacgtgcaaatcct 32
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctcca 110
|||||||||||||||||||||
Sbjct: 73 tgcacgtgctccccttctcca 93
>40666_mtr-MIR164c:mirbase
Length = 86
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 16 cttgttggagaagcagggcacgtgcaa 42
|||||||||||||||||||||||||||
Sbjct: 1 cttgttggagaagcagggcacgtgcaa 27
>41933_osa-MIR164c:mirbase
Length = 119
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctccaccatg 115
||||||||||||||||||||||||||
Sbjct: 89 tgcacgtgctccccttctccaccatg 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 tcttgttggagaagcagggcacgtgcaa 42
||||||||||||||||||| ||||||||
Sbjct: 5 tcttgttggagaagcagggtacgtgcaa 32
>41582_vvi-MIR164d:mirbase
Length = 118
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 12 agctcttgttggagaagcagggcacgtgca 41
|||||||| |||||||||||||||||||||
Sbjct: 2 agctcttgatggagaagcagggcacgtgca 31
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctccaccatgagttcct 122
||||||||||||||||||||| |||| ||||||
Sbjct: 86 tgcacgtgctccccttctccaacatgggttcct 118
>41579_vvi-MIR164a:mirbase
Length = 121
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 cttgttggagaagcagggcacgtgca 41
||||||||||||||||||||||||||
Sbjct: 6 cttgttggagaagcagggcacgtgca 31
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctccaccatgagttcct 122
||||||||||||||||||||| |||| ||||||
Sbjct: 89 tgcacgtgctccccttctccaacatgggttcct 121
>42507_sbi-MIR164e:mirbase
Length = 205
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctccaccat 114
|||||||||||||||||||||||||
Sbjct: 181 tgcacgtgctccccttctccaccat 205
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 gttggagaagcagggcacgtgca 41
|||||||||||||||||||||||
Sbjct: 1 gttggagaagcagggcacgtgca 23
>41741_bdi-MIR164e:mirbase
Length = 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 tgttggagaagcagggcacgtgcaa 42
|||||||||||||||||||||||||
Sbjct: 16 tgttggagaagcagggcacgtgcaa 40
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 87 ctgtgcacgtgctccccttctccaccatg 115
||||||||| |||||||||||||||||||
Sbjct: 87 ctgtgcacgcgctccccttctccaccatg 115
>40027_ath-MIR164a:mirbase
Length = 113
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 18 tgttggagaagcagggcacgtgcaa 42
|||||||||||||||||||||||||
Sbjct: 16 tgttggagaagcagggcacgtgcaa 40
>39818_aly-MIR164c:mirbase
Length = 115
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 4 gggtgagtagctcttgttggagaagcagggcacgtgc 40
||||||||| | |||| ||||||||||||||||||||
Sbjct: 1 gggtgagtaacacttgatggagaagcagggcacgtgc 37
>42715_zma-MIR164g:mirbase
Length = 171
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctccacca 113
||||||||||||||||||||||||
Sbjct: 148 tgcacgtgctccccttctccacca 171
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 ttggagaagcagggcacgtgca 41
||||||||||||||||||||||
Sbjct: 1 ttggagaagcagggcacgtgca 22
>40343_rco-MIR164a:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 16 cttgttggagaagcagggcacgtgcaagtcct 47
|||| |||||||||||||||||||||| ||||
Sbjct: 1 cttgctggagaagcagggcacgtgcaattcct 32
>40313_bra-MIR164a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 gttggagaagcagggcacgtgcaa 42
||||||||||||||||||||||||
Sbjct: 8 gttggagaagcagggcacgtgcaa 31
>40263_bna-MIR164:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 gttggagaagcagggcacgtgcaa 42
||||||||||||||||||||||||
Sbjct: 5 gttggagaagcagggcacgtgcaa 28
>39816_aly-MIR164a:mirbase
Length = 79
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 19 gttggagaagcagggcacgtgcaa 42
||||||||||||||||||||||||
Sbjct: 1 gttggagaagcagggcacgtgcaa 24
>41931_osa-MIR164a:mirbase
Length = 156
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 gttggagaagcagggcacgtgca 41
|||||||||||||||||||||||
Sbjct: 15 gttggagaagcagggcacgtgca 37
>41740_bdi-MIR164d:mirbase
Length = 186
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 gttggagaagcagggcacgtgca 41
|||||||||||||||||||||||
Sbjct: 16 gttggagaagcagggcacgtgca 38
>41738_bdi-MIR164b:mirbase
Length = 209
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 gttggagaagcagggcacgtgca 41
|||||||||||||||||||||||
Sbjct: 31 gttggagaagcagggcacgtgca 53
>41316_ptc-MIR164a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 cttgttggagaagcagggcacgtgcaa 42
|||| ||||||||||||||||||||||
Sbjct: 6 cttgctggagaagcagggcacgtgcaa 32
>41319_ptc-MIR164d:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgcaa 42
||||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgcaa 32
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctccaccatgagt 118
||||||||||||||| ||||| |||||||
Sbjct: 71 tgcacgtgctcccctcctccaacatgagt 99
>40665_mtr-MIR164b:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgcaa 42
||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcaa 27
>40344_rco-MIR164b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgcaa 42
||||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgcaa 27
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 90 tgcacgtgctccccttctccaccatg 115
||||||||||||||||||||| ||||
Sbjct: 77 tgcacgtgctccccttctccaacatg 102
>42712_zma-MIR164d:mirbase
Length = 216
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 20 tggagaagcagggcacgtgca 40
>42711_zma-MIR164c:mirbase
Length = 270
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 18 tggagaagcagggcacgtgca 38
>42710_zma-MIR164b:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgca 41
>42709_zma-MIR164a:mirbase
Length = 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 19 tggagaagcagggcacgtgca 39
>42637_tae-MIR164:mirbase
Length = 156
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>42506_sbi-MIR164d:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>42503_sbi-MIR164:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 1 tggagaagcagggcacgtgca 21
>41936_osa-MIR164f:mirbase
Length = 210
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 24 tggagaagcagggcacgtgca 44
>41932_osa-MIR164b:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 9 tggagaagcagggcacgtgca 29
>41742_bdi-MIR164f:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 144 tggagaagcagggcacgtgca 124
>41739_bdi-MIR164c:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 cttgttggagaagcagggcacgtgc 40
|||| ||||||||||||||||||||
Sbjct: 29 cttgctggagaagcagggcacgtgc 53
>41737_bdi-MIR164a:mirbase
Length = 193
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 31 tggagaagcagggcacgtgca 51
>41581_vvi-MIR164c:mirbase
Length = 97
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41320_ptc-MIR164e:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41317_ptc-MIR164b:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgca 31
>41278_ctr-MIR164:mirbase
Length = 297
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 22 tggagaagcagggcacgtgca 42
>41221_csi-MIR164:mirbase
Length = 278
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 14 tggagaagcagggcacgtgca 34
>40345_rco-MIR164c:mirbase
Length = 116
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 6 tggagaagcagggcacgtgca 26
>40029_ath-MIR164c:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 16 cttgttggagaagcagggcacgtgc 40
|||| ||||||||||||||||||||
Sbjct: 6 cttgatggagaagcagggcacgtgc 30
>40028_ath-MIR164b:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>39817_aly-MIR164b:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgca 41
|||||||||||||||||||||
Sbjct: 3 tggagaagcagggcacgtgca 23
>42714_zma-MIR164f:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgc 40
||||||||||||||||||||
Sbjct: 2 tggagaagcagggcacgtgc 21
>42504_sbi-MIR164b:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgc 40
||||||||||||||||||||
Sbjct: 21 tggagaagcagggcacgtgc 40
>41934_osa-MIR164d:mirbase
Length = 94
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 tggagaagcagggcacgtgc 40
||||||||||||||||||||
Sbjct: 11 tggagaagcagggcacgtgc 30
