miRNEST 2.0, an integrative microRNA resource :: BLAST
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 72 tatggtttgattgagccgcgccaatatc 99
||||||| ||||||||||||||||||||
Sbjct: 51 tatggttggattgagccgcgccaatatc 78
>40696_mtr-MIR171b:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatcttgt 103
|||||||||||||||| |||||||||||
Sbjct: 66 gtttgattgagccgcgtcaatatcttgt 93
>41540_sly-MIR171c:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 tttgattgagccgcgccaatatc 99
|||||||||||||||||||||||
Sbjct: 76 tttgattgagccgcgccaatatc 98
>41231_csi-MIR171a:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 tttgattgagccgcgccaatatc 99
|||||||||||||||||||||||
Sbjct: 65 tttgattgagccgcgccaatatc 87
>41211_ccl-MIR171:mirbase
Length = 321
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 tttgattgagccgcgccaatatc 99
|||||||||||||||||||||||
Sbjct: 120 tttgattgagccgcgccaatatc 142
>42774_zma-MIR171n:mirbase
Length = 78
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatct 100
||||||||||||||||||||||
Sbjct: 57 tgattgagccgcgccaatatct 78
>41981_osa-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatct 100
||||||||||||||||||||||
Sbjct: 67 tgattgagccgcgccaatatct 88
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatct 100
||||||||||||||||||||||
Sbjct: 50 tgattgagccgcgccaatatct 71
>41390_ptc-MIR171j:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 72 tatggtttgattgagccgcgccaata 97
||||||| ||||||||||||||||||
Sbjct: 60 tatggttggattgagccgcgccaata 85
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatctt 101
|||||||||||||| |||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatctt 102
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 ggtttgattgagccgcgccaatatct 100
||||||||||||||| ||||||||||
Sbjct: 76 ggtttgattgagccgtgccaatatct 101
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 75 ggtttgattgagccgcgccaatatct 100
||||||||||||||| ||||||||||
Sbjct: 76 ggtttgattgagccgtgccaatatct 101
>40322_bra-MIR171e:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatct 100
||||||||||||||||||||||
Sbjct: 84 tgattgagccgcgccaatatct 105
>40291_bna-MIR171g:mirbase
Length = 80
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatct 100
||||||||||||||||||||||
Sbjct: 58 tgattgagccgcgccaatatct 79
>40290_bna-MIR171f:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatct 100
||||||||||||||||||||||
Sbjct: 84 tgattgagccgcgccaatatct 105
>40060_ath-MIR171a:mirbase
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatct 100
||||||||||||||||||||||
Sbjct: 88 tgattgagccgcgccaatatct 109
>39849_aly-MIR171a:mirbase
Length = 198
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatct 100
||||||||||||||||||||||
Sbjct: 130 tgattgagccgcgccaatatct 151
>42761_zma-MIR171a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatc 99
|||||||||||||||||||||
Sbjct: 79 tgattgagccgcgccaatatc 99
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatc 99
|||||||||||||||||||||
Sbjct: 83 tgattgagccgcgccaatatc 103
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatc 99
|||||||||||||||||||||
Sbjct: 57 tgattgagccgcgccaatatc 77
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 79 tgattgagccgcgccaatatc 99
|||||||||||||||||||||
Sbjct: 70 tgattgagccgcgccaatatc 90
>41538_sly-MIR171a:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatct 100
|||||||||||||| ||||||||||
Sbjct: 84 gtttgattgagccgtgccaatatct 108
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgattgagccgcgccaatatctt 101
||||||||||||| |||||||||||
Sbjct: 82 tttgattgagccgtgccaatatctt 106
>40364_rco-MIR171f:mirbase
Length = 111
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 72 tatggtttgattgagccgcgccaatatct 100
|||| ||||||||||||| ||||||||||
Sbjct: 79 tatgttttgattgagccgtgccaatatct 107
>40362_rco-MIR171d:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tttgattgagccgcgccaatatctt 101
||||||||||||| |||||||||||
Sbjct: 97 tttgattgagccgtgccaatatctt 121
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 119 gtttgattgagccgtgccaatatc 142
>41629_vvi-MIR171h:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
||||| ||||||||||||||||||
Sbjct: 63 gtttggttgagccgcgccaatatc 86
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 gattgagccgcgccaatatc 99
||||||||||||||||||||
Sbjct: 71 gattgagccgcgccaatatc 90
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 64 gtttgattgagccgtgccaatatc 87
>41623_vvi-MIR171b:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgattgagccgcgccaatatct 100
||||||||||||||| ||||||||
Sbjct: 67 tttgattgagccgcgtcaatatct 90
>41541_sly-MIR171d:mirbase
Length = 112
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 gattgagccgcgccaatatc 99
||||||||||||||||||||
Sbjct: 73 gattgagccgcgccaatatc 92
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tttgattgagccgcgccaatatct 100
||||||||||||| ||||||||||
Sbjct: 98 tttgattgagccgtgccaatatct 121
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 gattgagccgcgccaatatc 99
||||||||||||||||||||
Sbjct: 72 gattgagccgcgccaatatc 91
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 gattgagccgcgccaatatc 99
||||||||||||||||||||
Sbjct: 76 gattgagccgcgccaatatc 95
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 68 gtttgattgagccgtgccaatatc 91
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 69 gtttgattgagccgtgccaatatc 92
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 24 gtttgattgagccgtgccaatatc 1
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 74 tggtttgattgagccgcgccaatatctt 101
|||| ||||||||||| |||||||||||
Sbjct: 90 tggtctgattgagccgtgccaatatctt 117
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 gattgagccgcgccaatatc 99
||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatc 103
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 gattgagccgcgccaatatc 99
||||||||||||||||||||
Sbjct: 81 gattgagccgcgccaatatc 100
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 gattgagccgcgccaatatc 99
||||||||||||||||||||
Sbjct: 69 gattgagccgcgccaatatc 88
>40365_rco-MIR171g:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 gattgagccgcgccaatatc 99
||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatc 84
>40360_rco-MIR171b:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 60 gtttgattgagccgtgccaatatc 83
>40318_bra-MIR171a:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 59 gtttgattgagccgtgccaatatc 82
>40305_bol-MIR171a:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 65 gtttgattgagccgtgccaatatc 88
>40289_bna-MIR171e:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 64 gtttgattgagccgtgccaatatc 87
>40288_bna-MIR171d:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 65 gtttgattgagccgtgccaatatc 88
>39851_aly-MIR171c:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 76 gtttgattgagccgcgccaatatc 99
|||||||||||||| |||||||||
Sbjct: 71 gtttgattgagccgtgccaatatc 94
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 gattgagccgcgccaatatc 99
||||||||||||||||||||
Sbjct: 65 gattgagccgcgccaatatc 84
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 gattgagccgcgccaatatc 99
||||||||||||||||||||
Sbjct: 64 gattgagccgcgccaatatc 83
