miRNEST 2.0, an integrative microRNA resource :: BLAST
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 78 tcagattgagccgcgccaatatcactttct 107
||||||||||||||||||||||||||||||
Sbjct: 73 tcagattgagccgcgccaatatcactttct 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 gcgatgttggtgaggttcaatctgaaga 46
|||||||||||||||||||||| |||||
Sbjct: 9 gcgatgttggtgaggttcaatccgaaga 36
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 19 gcgatgttggtgaggttcaatctgaagat 47
|||||||||||||||||||||||||||||
Sbjct: 10 gcgatgttggtgaggttcaatctgaagat 38
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 78 tcagattgagccgcgccaatatcacttt 105
||||||||||||||||||||||||||||
Sbjct: 68 tcagattgagccgcgccaatatcacttt 95
>41118_tcc-MIR171c:mirbase
Length = 123
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 78 tcagattgagccgcgccaatatcactttc 106
|||||||||||||||||||||||||||||
Sbjct: 81 tcagattgagccgcgccaatatcactttc 109
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 gcgatgttggtgaggttcaatctgaaga 46
|||||||||||||||||||||| |||||
Sbjct: 17 gcgatgttggtgaggttcaatccgaaga 44
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 78 tcagattgagccgcgccaatatcacttt 105
||||||||||||||||||||||||||||
Sbjct: 69 tcagattgagccgcgccaatatcacttt 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 gcgatgttggtgaggttcaatctgaaga 46
|||||||||||||||||||||| |||||
Sbjct: 9 gcgatgttggtgaggttcaatccgaaga 36
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 78 tcagattgagccgcgccaatatcacttt 105
||||||||||||||||||||||||||||
Sbjct: 66 tcagattgagccgcgccaatatcacttt 93
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 gcgatgttggtgaggttcaatctgaaga 46
|||||||||||||||||||||| |||||
Sbjct: 4 gcgatgttggtgaggttcaatccgaaga 31
>40365_rco-MIR171g:mirbase
Length = 89
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 78 tcagattgagccgcgccaatatcacttt 105
||||||||||||||||||||||||||||
Sbjct: 62 tcagattgagccgcgccaatatcacttt 89
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 gcgatgttggtgaggttcaatctgaaga 46
|||||||||||||||||||||| |||||
Sbjct: 2 gcgatgttggtgaggttcaatccgaaga 29
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatcactttct 107
|||||||||||||||||||||||||||
Sbjct: 71 gattgagccgcgccaatatcactttct 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 gcgatgttggtgaggttcaatctgaaga 46
|||||||||||||||||||||| |||||
Sbjct: 10 gcgatgttggtgaggttcaatccgaaga 37
>41541_sly-MIR171d:mirbase
Length = 112
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 78 tcagattgagccgcgccaatatcactt 104
|||||||||||||||||||||||||||
Sbjct: 70 tcagattgagccgcgccaatatcactt 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 19 gcgatgttggtgaggttcaatctgaaga 46
|||||||||||||||||||||| |||||
Sbjct: 10 gcgatgttggtgaggttcaatccgaaga 37
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 tcagattgagccgcgccaatatcac 102
|||||||||||||||||||||||||
Sbjct: 62 tcagattgagccgcgccaatatcac 86
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 78 tcagattgagccgcgccaatatcac 102
|||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatcac 85
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatcactt 104
||||||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatcactt 107
>41540_sly-MIR171c:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatcac 102
||||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcac 100
>41231_csi-MIR171a:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatcac 102
||||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatcac 89
>41211_ccl-MIR171:mirbase
Length = 321
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatcac 102
||||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatcac 144
>39739_smo-MIR171d:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 82 attgagccgcgccaatatcac 102
|||||||||||||||||||||
Sbjct: 71 attgagccgcgccaatatcac 91
>42774_zma-MIR171n:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>42761_zma-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>41981_osa-MIR171a:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>40322_bra-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 gattgagccgcgccaatatc 100
||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150
>39736_smo-MIR171a:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 80 agattgagccgcgccaatatcact 103
||||||||||| ||||||||||||
Sbjct: 102 agattgagccgtgccaatatcact 125
