miRNEST 2.0, an integrative microRNA resource :: BLAST
>41383_ptc-MIR171c:mirbase
Length = 104
Score = 137 bits (69), Expect = 2e-33
Identities = 93/101 (92%)
Strand = Plus / Plus
Query: 9 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcg 68
||||||||||||||||||||||||||||||||||||||||||||| | || | | | |
Sbjct: 1 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacacgtgaaagtaattg 60
Query: 69 taaaatacgatctcagattgagccgcgccaatatcactttc 109
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaaatacgatctcagattgagccgcgccaatatcactttc 101
>40699_mtr-MIR171e:mirbase
Length = 93
Score = 135 bits (68), Expect = 8e-33
Identities = 89/95 (93%), Gaps = 2/95 (2%)
Strand = Plus / Plus
Query: 14 aaagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaaaa 73
|||||||||||||||||||||||||||||||||||||||| ||| || ||| ||||||
Sbjct: 1 aaagcgatgttggtgaggttcaatccgaagacggatttac--atgtatagagttgtaaaa 58
Query: 74 tacgatctcagattgagccgcgccaatatcacttt 108
|||||||||||||||||||||||||||||||||||
Sbjct: 59 tacgatctcagattgagccgcgccaatatcacttt 93
>40365_rco-MIR171g:mirbase
Length = 89
Score = 111 bits (56), Expect = 1e-25
Identities = 84/93 (90%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 16 agcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaaaata 75
|||||||||||||||||||||||||||||||||||||| ||||| || ||||| |
Sbjct: 1 agcgatgttggtgaggttcaatccgaagacggatttac----acattctgttgtaaagga 56
Query: 76 cgatctcagattgagccgcgccaatatcacttt 108
|||||||||||||||||||||||||||||||||
Sbjct: 57 cgatctcagattgagccgcgccaatatcacttt 89
>41626_vvi-MIR171e:mirbase
Length = 103
Score = 97.6 bits (49), Expect = 2e-21
Identities = 87/100 (87%), Gaps = 6/100 (6%)
Strand = Plus / Plus
Query: 10 aaagaaagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgt 69
|||| |||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct: 3 aaagtaagcgatgttggtgaggttcaatccgaagacggatttacgaa------gagccgt 56
Query: 70 aaaatacgatctcagattgagccgcgccaatatcactttc 109
||| |||||||| ||||||||||||||||||||||||||
Sbjct: 57 aaagaacgatctctgattgagccgcgccaatatcactttc 96
>41541_sly-MIR171d:mirbase
Length = 112
Score = 93.7 bits (47), Expect = 3e-20
Identities = 83/93 (89%), Gaps = 4/93 (4%)
Strand = Plus / Plus
Query: 15 aagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgtaaaat 74
|||||||||||||||||||||||||||||||| ||||| || | ||| |||||||
Sbjct: 8 aagcgatgttggtgaggttcaatccgaagacgaatttatgctt--att--ttcgtaaaga 63
Query: 75 acgatctcagattgagccgcgccaatatcactt 107
|||||||||||||||||||||||||||||||||
Sbjct: 64 acgatctcagattgagccgcgccaatatcactt 96
>41384_ptc-MIR171d:mirbase
Length = 100
Score = 91.7 bits (46), Expect = 1e-19
Identities = 88/100 (88%), Gaps = 4/100 (4%)
Strand = Plus / Plus
Query: 9 aaaagaaagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcg 68
||||||||||||||||||||||||||||||||||||| ||||||| | | | | |
Sbjct: 1 aaaagaaagcgatgttggtgaggttcaatccgaagacagatttacac---gagtga-aag 56
Query: 69 taaaatacgatctcagattgagccgcgccaatatcacttt 108
|||||| |||||||||||||||||||||||||||||||||
Sbjct: 57 taaaatccgatctcagattgagccgcgccaatatcacttt 96
>41627_vvi-MIR171f:mirbase
Length = 103
Score = 77.8 bits (39), Expect = 2e-15
Identities = 83/98 (84%), Gaps = 6/98 (6%)
Strand = Plus / Plus
Query: 11 aagaaagcgatgttggtgaggttcaatccgaagacggatttacgcatgcattcagtcgta 70
|||||||||||||||||||||||||||| ||||| |||||| || || || |||
Sbjct: 4 aagaaagcgatgttggtgaggttcaatctgaagattgatttatgcttgaat------gta 57
Query: 71 aaatacgatctcagattgagccgcgccaatatcacttt 108
||| ||||||||||||||||||||||||||||||||
Sbjct: 58 aaaactgatctcagattgagccgcgccaatatcacttt 95
>41117_tcc-MIR171b:mirbase
Length = 120
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 81 tcagattgagccgcgccaatatcactttc 109
|||||||||||||||||||||||||||||
Sbjct: 78 tcagattgagccgcgccaatatcactttc 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 17 gcgatgttggtgaggttcaatccgaaga 44
|||||||||||||||||||||| |||||
Sbjct: 19 gcgatgttggtgaggttcaatctgaaga 46
>39479_ppt-MIR171b:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 80 ctcagattgagccgcgccaatatcac 105
||||||||||||||||||||||||||
Sbjct: 61 ctcagattgagccgcgccaatatcac 86
>39478_ppt-MIR171a:mirbase
Length = 91
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 81 tcagattgagccgcgccaatatcac 105
|||||||||||||||||||||||||
Sbjct: 61 tcagattgagccgcgccaatatcac 85
>42555_sbi-MIR171j:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatcactt 107
||||||||||||||||||||||||
Sbjct: 84 gattgagccgcgccaatatcactt 107
>39739_smo-MIR171d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 79 tctcagattgagccgcgccaatatcac 105
||||| |||||||||||||||||||||
Sbjct: 65 tctcaaattgagccgcgccaatatcac 91
>41981_osa-MIR171a:mirbase
Length = 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 agcgatgttggtgaggttcaatccga 41
|||||| |||||||||||||||||||
Sbjct: 7 agcgatattggtgaggttcaatccga 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatc 87
>41540_sly-MIR171c:mirbase
Length = 121
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatcac 105
||||||||||||||||||||||
Sbjct: 79 gattgagccgcgccaatatcac 100
>41231_csi-MIR171a:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatcac 105
||||||||||||||||||||||
Sbjct: 68 gattgagccgcgccaatatcac 89
>41211_ccl-MIR171:mirbase
Length = 321
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatcac 105
||||||||||||||||||||||
Sbjct: 123 gattgagccgcgccaatatcac 144
>42774_zma-MIR171n:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>42761_zma-MIR171a:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>42552_sbi-MIR171g:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 58 gattgagccgcgccaatatc 77
>41764_bdi-MIR171a:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 51 gattgagccgcgccaatatc 70
>41391_ptc-MIR171k:mirbase
Length = 78
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>41116_tcc-MIR171a:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 80 gattgagccgcgccaatatc 99
>40322_bra-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40291_bna-MIR171g:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 59 gattgagccgcgccaatatc 78
>40290_bna-MIR171f:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 85 gattgagccgcgccaatatc 104
>40060_ath-MIR171a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 89 gattgagccgcgccaatatc 108
>39849_aly-MIR171a:mirbase
Length = 198
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 84 gattgagccgcgccaatatc 103
||||||||||||||||||||
Sbjct: 131 gattgagccgcgccaatatc 150
>39736_smo-MIR171a:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 83 agattgagccgcgccaatatcact 106
||||||||||| ||||||||||||
Sbjct: 102 agattgagccgtgccaatatcact 125
