miRNEST 2.0, an integrative microRNA resource :: BLAST
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 103 bits (52), Expect = 3e-23
Identities = 76/83 (91%), Gaps = 2/83 (2%)
Strand = Plus / Plus
Query: 16 ggggatgttggaatggctcaatcaaatcaaatctcccaagctttttatgggtgttttaat 75
|||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||
Sbjct: 10 ggggatgttggaatggctcaatcaaatcaaatctcccaagggttt--tgggtcctttaat 67
Query: 76 ttgattgagccgtgccaatatca 98
||||||||||||||||||||||
Sbjct: 68 ctgattgagccgtgccaatatca 90
>40363_rco-MIR171e:mirbase
Length = 84
Score = 95.6 bits (48), Expect = 7e-21
Identities = 74/82 (90%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 16 ggggatgttggaatggctcaatcaaatcaaatctcccaagctttttatgggtgttttaat 75
||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||
Sbjct: 1 ggggatgttggaatggctcaatcaaatcaaatctcccaaagttt---tgggtcctttaat 57
Query: 76 ttgattgagccgtgccaatatc 97
|||||||||||||||||||||
Sbjct: 58 ctgattgagccgtgccaatatc 79
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 77.8 bits (39), Expect = 2e-15
Identities = 75/86 (87%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 16 ggggatgttggaatggctcaatcaaatcaaatctcccaagcttt--ttatgggtgtttta 73
||||||||||| |||||||||||| |||||||||||||| || | | ||||| ||||
Sbjct: 8 ggggatgttgggatggctcaatcatatcaaatctcccaaactatgatgttgggtcgttta 67
Query: 74 atttgattgagccgtgccaatatcac 99
|| |||||||||||||||||||||||
Sbjct: 68 atctgattgagccgtgccaatatcac 93
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 69.9 bits (35), Expect = 4e-13
Identities = 74/86 (86%), Gaps = 2/86 (2%)
Strand = Plus / Plus
Query: 16 ggggatgttggaatggctcaatcaaatcaaatctcccaagcttt--ttatgggtgtttta 73
||||||||||| |||||||||||| ||||||||||||| | | | ||||| |||||
Sbjct: 8 ggggatgttgggatggctcaatcatgtcaaatctcccaaattatgatgttgggtctttta 67
Query: 74 atttgattgagccgtgccaatatcac 99
|| |||||||||||||||||||||||
Sbjct: 68 atctgattgagccgtgccaatatcac 93
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 74 atttgattgagccgtgccaatatcacgt 101
||||||||||||||||||||||||||||
Sbjct: 74 atttgattgagccgtgccaatatcacgt 101
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 74 atttgattgagccgtgccaatatcacgt 101
||||||||||||||||||||||||||||
Sbjct: 64 atttgattgagccgtgccaatatcacgt 91
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcacgt 86
>41983_osa-MIR171c:mirbase
Length = 99
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatcacgt 93
>41982_osa-MIR171b:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatcacgt 94
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcacgt 91
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatcacgt 94
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 69 tttgattgagccgtgccaatatcacgt 95
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatatcacgt 96
>41216_crt-MIR171:mirbase
Length = 201
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatatcacgt 185
>40360_rco-MIR171b:mirbase
Length = 91
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 61 tttgattgagccgtgccaatatcacgt 87
>40359_rco-MIR171a:mirbase
Length = 92
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatcacgt 88
>40062_ath-MIR171c:mirbase
Length = 116
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 74 atttgattgagccgtgccaatatcacg 100
|||||||||||||||||||||||||||
Sbjct: 84 atttgattgagccgtgccaatatcacg 110
>39851_aly-MIR171c:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||||
Sbjct: 72 tttgattgagccgtgccaatatcacgt 98
>42762_zma-MIR171b:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacg 100
||||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcacg 85
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 70 tttaatttgattgagccgtgccaatatcac 99
|||||| |||||||||||||||||||||||
Sbjct: 48 tttaatctgattgagccgtgccaatatcac 77
>40457_gma-MIR171c:mirbase
Length = 104
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 74 atttgattgagccgtgccaatatcac 99
||||||||||||||||||||||||||
Sbjct: 69 atttgattgagccgtgccaatatcac 94
>40318_bra-MIR171a:mirbase
Length = 85
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacg 100
||||||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatcacg 85
>40305_bol-MIR171a:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacg 100
||||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcacg 91
>40289_bna-MIR171e:mirbase
Length = 92
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacg 100
||||||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatatcacg 90
>40288_bna-MIR171d:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacg 100
||||||||||||||||||||||||||
Sbjct: 66 tttgattgagccgtgccaatatcacg 91
>42770_zma-MIR171j:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 77 tgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatcacgt 114
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 77 tgattgagccgtgccaatatcacgt 101
|||||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatcacgt 117
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcac 99
|||||||||||||||||||||||||
Sbjct: 120 tttgattgagccgtgccaatatcac 144
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcac 99
|||||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatcac 86
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 70 tttaatttgattgagccgtgccaatatca 98
|||||| ||||||||||||||||||||||
Sbjct: 61 tttaatctgattgagccgtgccaatatca 89
>41182_aqc-MIR171f:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 74 atttgattgagccgtgccaatatcacgtt 102
|||| ||||||||||||||||||||||||
Sbjct: 59 atttaattgagccgtgccaatatcacgtt 87
>42769_zma-MIR171i:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgattgagccgtgccaatatcac 99
||||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatcac 87
>42766_zma-MIR171f:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ttgattgagccgtgccaatatcac 99
||||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatcac 137
>41539_sly-MIR171b:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 74 atttgattgagccgtgccaatatcacgt 101
|||| |||||||||||||||||||||||
Sbjct: 59 atttaattgagccgtgccaatatcacgt 86
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 74 atttgattgagccgtgccaatatc 97
||||||||||||||||||||||||
Sbjct: 97 atttgattgagccgtgccaatatc 120
>40361_rco-MIR171c:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 70 tttaatttgattgagccgtgccaatatc 97
|||||| |||||||||||||||||||||
Sbjct: 55 tttaatctgattgagccgtgccaatatc 82
>42763_zma-MIR171c:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
||||| |||||||||||||||||||||
Sbjct: 77 tttgactgagccgtgccaatatcacgt 103
>42641_tae-MIR171b:mirbase
Length = 138
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gattgagccgtgccaatatcacg 100
|||||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatcacg 112
>41986_osa-MIR171f:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 tgattgagccgtgccaatatcac 99
|||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatcac 119
>41540_sly-MIR171c:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
||||||||||||| |||||||||||||
Sbjct: 76 tttgattgagccgcgccaatatcacgt 102
>41538_sly-MIR171a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatc 97
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>41231_csi-MIR171a:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
||||||||||||| |||||||||||||
Sbjct: 65 tttgattgagccgcgccaatatcacgt 91
>41211_ccl-MIR171:mirbase
Length = 321
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatcacgt 101
||||||||||||| |||||||||||||
Sbjct: 120 tttgattgagccgcgccaatatcacgt 146
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 75 tttgattgagccgtgccaatatc 97
|||||||||||||||||||||||
Sbjct: 23 tttgattgagccgtgccaatatc 1
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatc 97
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatc 97
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 77 tgattgagccgtgccaatatcac 99
|||||||||||||||||||||||
Sbjct: 75 tgattgagccgtgccaatatcac 97
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatc 97
|||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatatc 141
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatc 97
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatc 97
|||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatatc 100
>40364_rco-MIR171f:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatc 97
|||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatatc 97
|||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatatc 119
>40321_bra-MIR171d:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gattgagccgtgccaatatcacg 100
|||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcacg 93
>40320_bra-MIR171c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gattgagccgtgccaatatcacg 100
|||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcacg 87
>40319_bra-MIR171b:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gattgagccgtgccaatatcacg 100
|||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcacg 94
>40287_bna-MIR171c:mirbase
Length = 88
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gattgagccgtgccaatatcacg 100
|||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcacg 87
>40286_bna-MIR171b:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gattgagccgtgccaatatcacg 100
|||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcacg 93
>40285_bna-MIR171a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gattgagccgtgccaatatcacg 100
|||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcacg 94
>40061_ath-MIR171b:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gattgagccgtgccaatatcacg 100
|||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcacg 98
>39850_aly-MIR171b:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 78 gattgagccgtgccaatatcacg 100
|||||||||||||||||||||||
Sbjct: 87 gattgagccgtgccaatatcacg 109
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 75 tttgattgagccgtgccaatat 96
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>40454_gma-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 79 attgagccgtgccaatatcacg 100
||||||||||||||||||||||
Sbjct: 70 attgagccgtgccaatatcacg 91
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 78 gattgagccgtgccaatatcac 99
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
