miRNEST 2.0, an integrative microRNA resource :: BLAST
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 73.8 bits (37), Expect = 2e-14
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 20 tgatgttggcacggttcaatcggatcaaatctctcagtggctgagtcctttagtctgatt 79
||||||||| |||| |||||| | |||| ||||| ||| ||||||||||| |||||||
Sbjct: 13 tgatgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgatt 72
Query: 80 gagccgtgccaatatca 96
|||||||||||||||||
Sbjct: 73 gagccgtgccaatatca 89
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 60.0 bits (30), Expect = 4e-10
Identities = 72/86 (83%)
Strand = Plus / Plus
Query: 15 aaatttgatgttggcacggttcaatcggatcaaatctctcagtggctgagtcctttagtc 74
|||||||||||||||| | |||||| |||||| | |||| ||| || || |||| ||
Sbjct: 5 aaatttgatgttggcagagctcaatcaaatcaaagcactcaatggttgggttctttcatc 64
Query: 75 tgattgagccgtgccaatatcacatt 100
||||||||||||||||||||| ||||
Sbjct: 65 tgattgagccgtgccaatatcgcatt 90
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 64 gtcctttagtctgattgagccgtgccaatatcac 97
|||||||| |||||||||||||||||||||||||
Sbjct: 44 gtcctttaatctgattgagccgtgccaatatcac 77
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 58.0 bits (29), Expect = 1e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 64 gtcctttagtctgattgagccgtgccaatatca 96
|||||||| ||||||||||||||||||||||||
Sbjct: 58 gtcctttaatctgattgagccgtgccaatatca 90
>40361_rco-MIR171c:mirbase
Length = 87
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 59 gctgagtcctttagtctgattgagccgtgccaatatc 95
||||||| ||||| |||||||||||||||||||||||
Sbjct: 46 gctgagttctttaatctgattgagccgtgccaatatc 82
>40695_mtr-MIR171:mirbase
Length = 114
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 61 tgagtcctttagtctgattgagccgtgccaatatca 96
||||| |||||||||||||||| |||||||||||||
Sbjct: 61 tgagttctttagtctgattgagtcgtgccaatatca 96
>40363_rco-MIR171e:mirbase
Length = 84
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 64 gtcctttagtctgattgagccgtgccaatatc 95
|||||||| |||||||||||||||||||||||
Sbjct: 48 gtcctttaatctgattgagccgtgccaatatc 79
>41986_osa-MIR171f:mirbase
Length = 127
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 72 gtctgattgagccgtgccaatatcaca 98
|||||||||||||||||||||||||||
Sbjct: 94 gtctgattgagccgtgccaatatcaca 120
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 68 tttagtctgattgagccgtgccaatatcaca 98
|||| ||||||||||||||||||||||||||
Sbjct: 64 tttaatctgattgagccgtgccaatatcaca 94
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 68 tttagtctgattgagccgtgccaatatcaca 98
|||| ||||||||||||||||||||||||||
Sbjct: 64 tttaatctgattgagccgtgccaatatcaca 94
>42770_zma-MIR171j:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatcac 97
|||||||||||||||||||||||||
Sbjct: 88 tctgattgagccgtgccaatatcac 112
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatcac 97
|||||||||||||||||||||||||
Sbjct: 91 tctgattgagccgtgccaatatcac 115
>40457_gma-MIR171c:mirbase
Length = 104
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcacat 99
|||||||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatcacat 96
>42769_zma-MIR171i:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcaca 98
||||||||||||||||||||||||
Sbjct: 65 tgattgagccgtgccaatatcaca 88
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 gatgttggcacggttcaatc 40
||||||||||||||||||||
Sbjct: 21 gatgttggcacggttcaatc 40
>42766_zma-MIR171f:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcaca 98
||||||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatcaca 138
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcaca 98
||||||||||||||||||||||||
Sbjct: 122 tgattgagccgtgccaatatcaca 145
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 72 gtctgattgagccgtgccaatatc 95
||||||||||||||||||||||||
Sbjct: 92 gtctgattgagccgtgccaatatc 115
>42765_zma-MIR171e:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 85 tctgattgagccgtgccaatatc 107
>42764_zma-MIR171d:mirbase
Length = 121
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 80 tctgattgagccgtgccaatatc 102
>42762_zma-MIR171b:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatcac 84
>42640_tae-MIR171a:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatcac 84
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 66 tctgattgagccgtgccaatatc 88
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 112 tctgattgagccgtgccaatatc 134
>41985_osa-MIR171e:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 87 tctgattgagccgtgccaatatc 109
>41984_osa-MIR171d:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 103 tctgattgagccgtgccaatatc 125
>41983_osa-MIR171c:mirbase
Length = 99
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatcac 91
>41982_osa-MIR171b:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatcac 92
>41890_hvu-MIR171:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 110 tctgattgagccgtgccaatatc 132
>41874_far-MIR171:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 88 tctgattgagccgtgccaatatc 110
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatcac 86
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 112 tctgattgagccgtgccaatatc 134
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 gatgttggcacggttcaatc 40
||||||||||||||||||||
Sbjct: 32 gatgttggcacggttcaatc 51
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatcac 89
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 70 tgattgagccgtgccaatatcac 92
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 73 tctgattgagccgtgccaatatc 95
|||||||||||||||||||||||
Sbjct: 99 tctgattgagccgtgccaatatc 121
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 72 tgattgagccgtgccaatatcac 94
>41216_crt-MIR171:mirbase
Length = 201
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 161 tgattgagccgtgccaatatcac 183
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatcac 99
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 77 tgattgagccgtgccaatatcac 99
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatcac 89
>40360_rco-MIR171b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 63 tgattgagccgtgccaatatcac 85
>40359_rco-MIR171a:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 64 tgattgagccgtgccaatatcac 86
>40318_bra-MIR171a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatatcac 84
>40305_bol-MIR171a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatcac 90
>40289_bna-MIR171e:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 67 tgattgagccgtgccaatatcac 89
>40288_bna-MIR171d:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatcac 90
>40062_ath-MIR171c:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatcac 109
>39851_aly-MIR171c:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 75 tgattgagccgtgccaatatcac 97
|||||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatcac 96
>42641_tae-MIR171b:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgtgccaatatcac 97
||||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatcac 111
>40321_bra-MIR171d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgtgccaatatcac 97
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40320_bra-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgtgccaatatcac 97
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40319_bra-MIR171b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgtgccaatatcac 97
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40287_bna-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgtgccaatatcac 97
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40286_bna-MIR171b:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgtgccaatatcac 97
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40285_bna-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgtgccaatatcac 97
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40061_ath-MIR171b:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgtgccaatatcac 97
||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcac 97
>39850_aly-MIR171b:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgtgccaatatcac 97
||||||||||||||||||||||
Sbjct: 87 gattgagccgtgccaatatcac 108
>39737_smo-MIR171b:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 78 ttgagccgtgccaatatcacat 99
||||||||||||||||||||||
Sbjct: 71 ttgagccgtgccaatatcacat 92
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 76 gattgagccgtgccaatatcac 97
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
