miRNEST 2.0, an integrative microRNA resource :: BLAST
>40458_gma-MIR172a:mirbase
Length = 159
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatcggccataaatgacttcac 159
|||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 118 tgagaatcttgatgatgctgcatcagccataaacgacttcac 159
Score = 40.1 bits (20), Expect = 5e-04
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 3 cagtcgttttttgctgctgcagcattatcaagattcatatgcaa 46
|||||||| ||||| | || ||||| ||||||||||| ||||||
Sbjct: 5 cagtcgttatttgcggatgtagcatcatcaagattcacatgcaa 48
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 60.0 bits (30), Expect = 5e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatcggccataaatgact 155
||||||||||||||||||||||||||| ||||| ||||
Sbjct: 147 tgagaatcttgatgatgctgcatcggcaataaacgact 184
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 3 cagtcgttttttgctgctgcagcattatcaagattcatatgcaaat 48
|||||||| ||||| | || ||||| ||||||||||| ||||||||
Sbjct: 5 cagtcgttgtttgcgggtgtagcatcatcaagattcacatgcaaat 50
>40459_gma-MIR172b:mirbase
Length = 153
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatcggccataaa 150
|||||||||||||||||||||||| ||||||||
Sbjct: 112 tgagaatcttgatgatgctgcatcagccataaa 144
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 3 cagtcgttttttgctgctgcagcattatcaagattcatatgcaaat 48
|||||||| ||||| | || ||||| ||||||||||| ||||||||
Sbjct: 5 cagtcgttgtttgcggatgtagcatcatcaagattcacatgcaaat 50
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatcggc 144
||||||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcatcggc 123
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 117 atgagaatcttgatgatgctgcatcggc 144
||||||||||||||||||||||||||||
Sbjct: 32 atgagaatcttgatgatgctgcatcggc 5
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatcggccataa 149
||||||||||||||||||||||||||| ||||
Sbjct: 130 tgagaatcttgatgatgctgcatcggcaataa 161
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatcggccataa 149
|||||||||||||||||||||||| |||||||
Sbjct: 97 tgagaatcttgatgatgctgcatcagccataa 128
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatcggccataa 149
||||||||||||||||||||||||||| ||||
Sbjct: 109 tgagaatcttgatgatgctgcatcggcaataa 140
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 56.0 bits (28), Expect = 8e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatcggccataa 149
|||||||||||||||||||||||| |||||||
Sbjct: 98 tgagaatcttgatgatgctgcatcagccataa 129
>40063_ath-MIR172a:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatcggc 144
||||||||||||||||||||||||||||
Sbjct: 75 atgagaatcttgatgatgctgcatcggc 102
>39852_aly-MIR172a:mirbase
Length = 149
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatcggc 144
||||||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcatcggc 123
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 118 tgagaatcttgatgatgctgcatcggc 144
|||||||||||||||||||||||||||
Sbjct: 31 tgagaatcttgatgatgctgcatcggc 5
>40461_gma-MIR172d:mirbase
Length = 150
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 4 agtcgttttttgctgctgcagcattatcaagattc 38
|||||||| ||||||||||||||| ||||||||||
Sbjct: 146 agtcgtttattgctgctgcagcatcatcaagattc 112
>42560_sbi-MIR172d:mirbase
Length = 88
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 115 gcatgagaatcttgatgatgctgcat 140
||||||||||||||||||||||||||
Sbjct: 63 gcatgagaatcttgatgatgctgcat 88
>41233_csi-MIR172a:mirbase
Length = 162
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatcggccataaatgact 155
|||||||||||||||||||||| |||| || |||||||
Sbjct: 113 tgagaatcttgatgatgctgcaacggcgattaatgact 150
>41993_osa-MIR172d:mirbase
Length = 130
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatc 141
|||||||||||||||||||||||||
Sbjct: 88 atgagaatcttgatgatgctgcatc 112
>41725_ata-MIR172:mirbase
Length = 277
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatc 141
|||||||||||||||||||||||||
Sbjct: 206 atgagaatcttgatgatgctgcatc 230
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatc 141
|||||||||||||||||||||||||
Sbjct: 95 atgagaatcttgatgatgctgcatc 119
>40324_bra-MIR172b:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatc 141
|||||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgcatc 103
>40323_bra-MIR172a:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatc 141
|||||||||||||||||||||||||
Sbjct: 84 atgagaatcttgatgatgctgcatc 108
>40307_bol-MIR172b:mirbase
Length = 107
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatc 141
|||||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgcatc 103
>40306_bol-MIR172a:mirbase
Length = 119
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatc 141
|||||||||||||||||||||||||
Sbjct: 84 atgagaatcttgatgatgctgcatc 108
>40064_ath-MIR172b:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatc 141
|||||||||||||||||||||||||
Sbjct: 68 atgagaatcttgatgatgctgcatc 92
>39853_aly-MIR172b:mirbase
Length = 146
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcatc 141
|||||||||||||||||||||||||
Sbjct: 90 atgagaatcttgatgatgctgcatc 114
>42778_zma-MIR172d:mirbase
Length = 74
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcat 140
||||||||||||||||||||||||
Sbjct: 51 atgagaatcttgatgatgctgcat 74
>42777_zma-MIR172c:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcat 140
||||||||||||||||||||||||
Sbjct: 100 atgagaatcttgatgatgctgcat 123
>42776_zma-MIR172b:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcat 140
||||||||||||||||||||||||
Sbjct: 103 atgagaatcttgatgatgctgcat 126
>42775_zma-MIR172a:mirbase
Length = 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcat 140
||||||||||||||||||||||||
Sbjct: 60 atgagaatcttgatgatgctgcat 83
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcat 140
||||||||||||||||||||||||
Sbjct: 96 atgagaatcttgatgatgctgcat 119
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcat 140
||||||||||||||||||||||||
Sbjct: 79 atgagaatcttgatgatgctgcat 102
>41990_osa-MIR172a:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatc 141
||||||||||||||||||||||||
Sbjct: 77 tgagaatcttgatgatgctgcatc 100
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgcat 140
||||||||||||||||||||||||
Sbjct: 76 atgagaatcttgatgatgctgcat 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 121 gaatcttgatgatgctgcatc 141
|||||||||||||||||||||
Sbjct: 28 gaatcttgatgatgctgcatc 8
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcggc 144
||||||||||||||||||||||||
Sbjct: 105 gaatcttgatgatgctgcatcggc 128
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcggc 144
||||||||||||||||||||||||
Sbjct: 154 gaatcttgatgatgctgcatcggc 177
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcggccataaatg 152
||||||||||||||||||| |||| |||||||
Sbjct: 116 gaatcttgatgatgctgcagcggcaataaatg 147
>40463_gma-MIR172f:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatc 141
||||||||||||||||||||||||
Sbjct: 107 tgagaatcttgatgatgctgcatc 130
>41991_osa-MIR172b:mirbase
Length = 238
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcgg 143
|||||||||||||||||||||||
Sbjct: 209 gaatcttgatgatgctgcatcgg 231
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcgg 143
|||||||||||||||||||||||
Sbjct: 205 gaatcttgatgatgctgcatcgg 227
>41543_sly-MIR172b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcat 140
|||||||||||||||||||||||
Sbjct: 113 tgagaatcttgatgatgctgcat 135
>40462_gma-MIR172e:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcggccataaatgact 155
||||||||||||||||||| | || ||||||||||
Sbjct: 115 gaatcttgatgatgctgcagcagcaataaatgact 149
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 4 agtcgttttttgctgctgcagcattatcaagattc 38
|||| ||| ||||||||||||||| ||||||||||
Sbjct: 149 agtcatttattgctgctgcagcatcatcaagattc 115
>40460_gma-MIR172c:mirbase
Length = 153
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcggccataaatgact 155
||||||||||||||||||| | || ||||||||||
Sbjct: 115 gaatcttgatgatgctgcagcagcaataaatgact 149
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 4 agtcgttttttgctgctgcagcattatcaagattc 38
|||| ||| ||||||||||||||| ||||||||||
Sbjct: 149 agtcatttattgctgctgcagcatcatcaagattc 115
>40066_ath-MIR172d:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatcggc 144
|||||||||||||||||||||| ||||
Sbjct: 86 tgagaatcttgatgatgctgcagcggc 112
>40065_ath-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgca 139
|||||||||||||||||||||||
Sbjct: 95 atgagaatcttgatgatgctgca 117
>39855_aly-MIR172d:mirbase
Length = 163
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 118 tgagaatcttgatgatgctgcatcggc 144
|||||||||||||||||||||| ||||
Sbjct: 110 tgagaatcttgatgatgctgcagcggc 136
>39854_aly-MIR172c:mirbase
Length = 133
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 atgagaatcttgatgatgctgca 139
|||||||||||||||||||||||
Sbjct: 95 atgagaatcttgatgatgctgca 117
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcggccataaa 150
||||||||||||||||||| |||| |||||
Sbjct: 109 gaatcttgatgatgctgcagcggcaataaa 138
>41542_sly-MIR172a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 119 gagaatcttgatgatgctgcat 140
||||||||||||||||||||||
Sbjct: 85 gagaatcttgatgatgctgcat 106
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcg 142
||||||||||||||||||||||
Sbjct: 87 gaatcttgatgatgctgcatcg 108
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcggccataa 149
||||||||||||||||||| |||| ||||
Sbjct: 115 gaatcttgatgatgctgcagcggcaataa 143
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcggccataa 149
||||||||||||||||||| |||| ||||
Sbjct: 115 gaatcttgatgatgctgcagcggcaataa 143
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatc 141
|||||||||||||||||||||
Sbjct: 124 gaatcttgatgatgctgcatc 144
>40067_ath-MIR172e:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatc 141
|||||||||||||||||||||
Sbjct: 96 gaatcttgatgatgctgcatc 116
>39856_aly-MIR172e:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatc 141
|||||||||||||||||||||
Sbjct: 99 gaatcttgatgatgctgcatc 119
>42779_zma-MIR172e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcat 140
||||||||||||||||||||
Sbjct: 136 gaatcttgatgatgctgcat 155
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcat 140
||||||||||||||||||||
Sbjct: 151 gaatcttgatgatgctgcat 170
>41992_osa-MIR172c:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 12 tttgctgctgcagcattatcaagattca 39
||||||| |||||||| |||||||||||
Sbjct: 108 tttgctggtgcagcatcatcaagattca 81
>41235_csi-MIR172c:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 15 gctgctgcagcattatcaagattc 38
||||||||||||| ||||||||||
Sbjct: 144 gctgctgcagcatcatcaagattc 121
>40366_rco-MIR172:mirbase
Length = 144
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcatcggc 144
||||||||||||||||||| ||||
Sbjct: 120 gaatcttgatgatgctgcagcggc 143
