miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41236_csi-MIR319:mirbase
Length = 123
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 93 tttggactgaagggagctcctaattctt 120
||||||||||||||||||||||||||||
Sbjct: 90 tttggactgaagggagctcctaattctt 117
>41637_vvi-MIR319e:mirbase
Length = 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 93 tttggactgaagggagctcctaattctt 120
|||||||||||||||||||||| |||||
Sbjct: 76 tttggactgaagggagctcctagttctt 103
>40071_ath-MIR319c:mirbase
Length = 199
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tttggactgaagggagctcct 113
|||||||||||||||||||||
Sbjct: 169 tttggactgaagggagctcct 189
>39861_aly-MIR319d:mirbase
Length = 267
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tttggactgaagggagctcct 113
|||||||||||||||||||||
Sbjct: 203 tttggactgaagggagctcct 223
>39860_aly-MIR319c:mirbase
Length = 271
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tttggactgaagggagctcct 113
|||||||||||||||||||||
Sbjct: 203 tttggactgaagggagctcct 223
>41412_ptc-MIR319i:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 93 tttggactgaagggagctcctaattctt 120
||||| |||||||||||||| |||||||
Sbjct: 60 tttgggctgaagggagctcccaattctt 87
>41411_ptc-MIR319h:mirbase
Length = 195
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 ttggactgaagggagctcct 113
||||||||||||||||||||
Sbjct: 165 ttggactgaagggagctcct 184
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 ttggactgaagggagctcct 113
||||||||||||||||||||
Sbjct: 176 ttggactgaagggagctcct 195
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 ttggactgaagggagctcct 113
||||||||||||||||||||
Sbjct: 174 ttggactgaagggagctcct 193
>41408_ptc-MIR319e:mirbase
Length = 192
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 ttggactgaagggagctcct 113
||||||||||||||||||||
Sbjct: 164 ttggactgaagggagctcct 183
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 ttggactgaagggagctcct 113
||||||||||||||||||||
Sbjct: 410 ttggactgaagggagctcct 429
>40370_rco-MIR319d:mirbase
Length = 187
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 ttggactgaagggagctcct 113
||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctcct 181
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 ttggactgaagggagctcct 113
||||||||||||||||||||
Sbjct: 141 ttggactgaagggagctcct 160
