miRNEST 2.0, an integrative microRNA resource :: BLAST
>40293_bna-MIR390b:mirbase
Length = 105
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgccatc 44
||||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccatc 41
>40468_gma-MIR390a:mirbase
Length = 105
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgccat 43
|||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgccat 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 gcgctatctatcctgagtttcatgggttct 108
|||||||| |||||||||||||||| ||||
Sbjct: 67 gcgctatccatcctgagtttcatggcttct 96
>40467_gma-MIR390a:mirbase
Length = 105
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgccat 43
|||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgccat 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 79 gcgctatctatcctgagtttcatgggttct 108
|||||||| |||||||||||||||| ||||
Sbjct: 67 gcgctatccatcctgagtttcatggcttct 96
>40072_ath-MIR390a:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgccat 43
|||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccat 40
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 77 tggcgctatctatcctgagtttcatgggttcttc 110
|||||||||| |||||||||||||| || |||||
Sbjct: 67 tggcgctatccatcctgagtttcattggctcttc 100
>39862_aly-MIR390a:mirbase
Length = 129
Score = 65.9 bits (33), Expect = 6e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgccat 43
|||||||||||||||||||||||||||||||||
Sbjct: 19 agaatctgtaaagctcaggagggatagcgccat 51
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 77 tggcgctatctatcctgagtttcatgggttcttc 110
|||||||||| |||||||||||||| || |||||
Sbjct: 78 tggcgctatccatcctgagtttcattggctcttc 111
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 4 gtatgggagaatctgtaaagctcaggagggatagcgccat 43
|||||| ||||||||| |||||||||||||||||||||||
Sbjct: 1 gtatggaagaatctgttaagctcaggagggatagcgccat 40
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 79 gcgctatctatcctgagtttcatgggttcttcctgct 115
|||||||| |||||||||||||| |||||||| ||||
Sbjct: 94 gcgctatccatcctgagtttcatcggttcttcttgct 130
>41640_vvi-MIR390:mirbase
Length = 140
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 77 tggcgctatctatcctgagtttcatgggttcttc 110
|||||||||||||||||||||||| |||||||||
Sbjct: 107 tggcgctatctatcctgagtttcacgggttcttc 140
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgccat 43
||||||||| |||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccat 33
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgccat 43
||||||||| |||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccat 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 77 tggcgctatctatcctgagtttcatgggtt 106
||||||||||||||||||||| |||||||
Sbjct: 90 tggcgctatctatcctgagttctatgggtt 119
>41237_csi-MIR390:mirbase
Length = 154
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgccat 43
||||||||| |||||||||||||||||||||||
Sbjct: 11 agaatctgttaagctcaggagggatagcgccat 43
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 76 ctggcgctatctatcctgagtttcatgggttcttc 110
||||||||||| |||||||||||||||| ||||||
Sbjct: 95 ctggcgctatccatcctgagtttcatggcttcttc 129
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgccat 43
||||||||| |||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccat 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 79 gcgctatctatcctgagtttcatgggtt 106
|||||||| |||||||||||||| ||||
Sbjct: 87 gcgctatccatcctgagtttcatcggtt 114
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgccat 43
||||||||| |||||||||||||||||||||||
Sbjct: 5 agaatctgttaagctcaggagggatagcgccat 37
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 79 gcgctatctatcctgagtttcatgggttcttc 110
|||||||| |||||||||||||| ||||||||
Sbjct: 91 gcgctatccatcctgagtttcatcggttcttc 122
>40469_gma-MIR390b:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagc 38
||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 77 tggcgctatctatcctgagtttcatgggttct 108
|||||||||||||| |||| ||||||| ||||
Sbjct: 72 tggcgctatctatcttgagcttcatggcttct 103
>40294_bna-MIR390c:mirbase
Length = 128
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 16 ctgtaaagctcaggagggatagcgccat 43
||||||||||||||||||||||||||||
Sbjct: 18 ctgtaaagctcaggagggatagcgccat 45
>40292_bna-MIR390a:mirbase
Length = 144
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 16 ctgtaaagctcaggagggatagcgccat 43
||||||||||||||||||||||||||||
Sbjct: 28 ctgtaaagctcaggagggatagcgccat 55
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgcc 41
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 agaatctgtaaagctcaggagggatagcgcc 41
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 77 tggcgctatctatcctgagtttcat 101
|||||||||| ||||||||||||||
Sbjct: 77 tggcgctatccatcctgagtttcat 101
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 atctgtaaagctcaggagggatagcgccat 43
|||||| |||||||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgccat 33
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tggcgctatctatcctgagtt 97
|||||||||||||||||||||
Sbjct: 94 tggcgctatctatcctgagtt 114
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 4e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 79 gcgctatctatcctgagtttcatgggttcttcctgct 115
|||||||| |||||||||||||| |||||||| ||||
Sbjct: 88 gcgctatccatcctgagtttcatcggttcttcttgct 124
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 ctgtaaagctcaggagggatagcgccat 43
|||| |||||||||||||||||||||||
Sbjct: 16 ctgttaagctcaggagggatagcgccat 43
>40073_ath-MIR390b:mirbase
Length = 120
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 taaagctcaggagggatagcgccat 43
|||||||||||||||||||||||||
Sbjct: 13 taaagctcaggagggatagcgccat 37
>39863_aly-MIR390b:mirbase
Length = 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 19 taaagctcaggagggatagcgccat 43
|||||||||||||||||||||||||
Sbjct: 17 taaagctcaggagggatagcgccat 41
>40705_mtr-MIR390:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 16 ctgtaaagctcaggagggatagcgccat 43
|||| |||||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgccat 28
Score = 42.1 bits (21), Expect = 9e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 79 gcgctatctatcctgagtttcatgg 103
|||||||| ||||||||||||||||
Sbjct: 76 gcgctatccatcctgagtttcatgg 100
>40372_rco-MIR390b:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccat 43
|||||||||||||||||||||||
Sbjct: 6 aagctcaggagggatagcgccat 28
>39485_ppt-MIR390a:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgccat 43
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>40371_rco-MIR390a:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 ctgtaaagctcaggagggatagcgcc 41
|||| |||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgcc 26
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 77 tggcgctatctatcctgagtttca 100
|||||||||| |||||||||||||
Sbjct: 80 tggcgctatccatcctgagtttca 103
>42785_zma-MIR390b:mirbase
Length = 192
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgcc 41
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42784_zma-MIR390a:mirbase
Length = 181
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgcc 41
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42565_sbi-MIR390:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgcc 41
|||||||||||||||||||||
Sbjct: 3 aagctcaggagggatagcgcc 23
>41996_osa-MIR390:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgcc 41
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41773_bdi-MIR390b:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgcc 41
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41772_bdi-MIR390:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgcc 41
|||||||||||||||||||||
Sbjct: 31 aagctcaggagggatagcgcc 51
>39486_ppt-MIR390b:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 aagctcaggagggatagcgcc 41
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>39487_ppt-MIR390c:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 22 agctcaggagggatagcgcc 41
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
