miRNEST 2.0, an integrative microRNA resource :: BLAST
>41441_ptc-MIR396g:mirbase
Length = 168
Score = 61.9 bits (31), Expect = 2e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaacttggtactc 48
|||||||||||||||||||||||||||||| ||||
Sbjct: 4 catgcttttccacggctttcttgaacttggcactc 38
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 140 aagctcaagaaagccgtgggaaaacatga 168
|||||||||||||||||||||||| ||||
Sbjct: 140 aagctcaagaaagccgtgggaaaatatga 168
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 14 catgcttttccacggctttcttgaactt 41
||||||||||||||||||||||||||||
Sbjct: 131 catgcttttccacggctttcttgaactt 104
>39741_smo-MIR396:mirbase
Length = 168
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaacttggtactct 49
|||||||||||||||||||||||||| |||| ||||
Sbjct: 4 catgcttttccacggctttcttgaacctggtgctct 39
>40086_ath-MIR396b:mirbase
Length = 135
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 139 gaagctcaagaaagccgtgggaaaacatga 168
||||||||||||||| ||||||||||||||
Sbjct: 104 gaagctcaagaaagctgtgggaaaacatga 133
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 cttttccacggctttcttgaactt 41
||||||||| ||||||||||||||
Sbjct: 8 cttttccacagctttcttgaactt 31
>39878_aly-MIR396b:mirbase
Length = 188
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 139 gaagctcaagaaagccgtgggaaaacatga 168
||||||||||||||| ||||||||||||||
Sbjct: 132 gaagctcaagaaagctgtgggaaaacatga 161
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 139 gaagctcaagaaagccgtgggaaaacatg 167
|||||||||||||||||||||| ||||||
Sbjct: 125 gaagctcaagaaagccgtgggagaacatg 153
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
||||||||||||| ||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaactt 31
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 139 gaagctcaagaaagccgtgggaaaacatg 167
||||||||||||||| |||||||||||||
Sbjct: 109 gaagctcaagaaagctgtgggaaaacatg 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
||||||||||||| ||||||||||||||
Sbjct: 14 catgcttttccacagctttcttgaactt 41
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
||||||||||||| ||||||||||||||
Sbjct: 7 catgcttttccacagctttcttgaactt 34
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
||||||||||||| ||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaactt 31
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 139 gaagctcaagaaagccgtgggaaaacatg 167
||||||||||||||| |||||| ||||||
Sbjct: 116 gaagctcaagaaagctgtgggagaacatg 144
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 14 catgcttttccacggctttcttgaactt 41
|||||| |||||||||||||||||||||
Sbjct: 101 catgctattccacggctttcttgaactt 74
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
|||| |||||||| ||||||||||||||
Sbjct: 4 catgtttttccacagctttcttgaactt 31
>41212_ccl-MIR396:mirbase
Length = 277
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
||||||||||||| ||||||||||||||
Sbjct: 136 catgcttttccacagctttcttgaactt 163
>40476_gma-MIR396d:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
||||||||||||| ||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaactt 31
>40474_gma-MIR396b:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
||||||||||||| ||||||||||||||
Sbjct: 14 catgcttttccacagctttcttgaactt 41
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaact 40
||||||||||||| |||||||||||||
Sbjct: 7 catgcttttccacagctttcttgaact 33
>40475_gma-MIR396c:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 15 atgcttttccacggctttcttgaactt 41
|||||||||||| ||||||||||||||
Sbjct: 15 atgcttttccacagctttcttgaactt 41
>39381_pab-MIR396c:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttttccacggctttcttgaactt 41
|||||||||||||||||||||||
Sbjct: 23 ttttccacggctttcttgaactt 45
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 139 gaagctcaagaaagccgtgggaa 161
|||||||||||||||||||||||
Sbjct: 96 gaagctcaagaaagccgtgggaa 118
>39380_pab-MIR396b:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 ttttccacggctttcttgaactt 41
|||||||||||||||||||||||
Sbjct: 7 ttttccacggctttcttgaactt 29
>39379_pab-MIR396a:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 9e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 141 agctcaagaaagccgtgggaaaacatg 167
||||||||||||| |||||||||||||
Sbjct: 64 agctcaagaaagctgtgggaaaacatg 90
>41440_ptc-MIR396f:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 ttttccacggctttcttgaact 40
||||||||||||||||||||||
Sbjct: 9 ttttccacggctttcttgaact 30
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 tgcttttccacggctttcttgaactt 41
||||||||||| ||||||||||||||
Sbjct: 1 tgcttttccacagctttcttgaactt 26
>40379_rco-MIR396:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 16 tgcttttccacggctttcttgaactt 41
||||||||||| ||||||||||||||
Sbjct: 1 tgcttttccacagctttcttgaactt 26
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
||||| ||||||| ||||||||||||||
Sbjct: 14 catgcctttccacagctttcttgaactt 41
>42028_osa-MIR396c:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
||||| ||||||| ||||||||||||||
Sbjct: 4 catgcctttccacagctttcttgaactt 31
>41243_csi-MIR396c:mirbase
Length = 178
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 14 catgcttttccacggctttcttgaactt 41
|||| |||||||| ||||||||||||||
Sbjct: 6 catgtttttccacagctttcttgaactt 33
>39426_pta-MIR396:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 18 cttttccacggctttcttgaactt 41
||||||||| ||||||||||||||
Sbjct: 14 cttttccacagctttcttgaactt 37
