miRNEST 2.0, an integrative microRNA resource :: BLAST
>42046_osa-MIR399f:mirbase
Length = 117
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 91 ttgtgctctctgccaatggagatttgcccagcaat 125
|||| ||||||||||| ||||||||||||||||||
Sbjct: 77 ttgttctctctgccaaaggagatttgcccagcaat 111
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 54.0 bits (27), Expect = 3e-08
Identities = 45/50 (90%), Gaps = 2/50 (4%)
Strand = Plus / Plus
Query: 8 tgcagttgcattacagggcaa--atcttcactggcaggcagccactttgg 55
||||||||||||||||||||| |||| || |||||||| ||||||||||
Sbjct: 8 tgcagttgcattacagggcaaagatctccattggcaggctgccactttgg 57
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 99 tctgccaatggagatttgcccagcaattc 127
|||||||| |||||||||||| |||||||
Sbjct: 94 tctgccaaaggagatttgcccggcaattc 122
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 98 ctctgccaatggagatttgcccagcaat 125
||||||||| ||||||||||||||||||
Sbjct: 78 ctctgccaaaggagatttgcccagcaat 105
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 92 tgtgctctctgccaatggagatttgcccagcaattc 127
||||| ||||||||| |||||||||||| |||||||
Sbjct: 73 tgtgccctctgccaaaggagatttgcccggcaattc 108
>41246_csi-MIR399a:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 99 tctgccaatggagatttgcccagcaattccactgca 134
|||||||| |||||||||||| |||||||| |||||
Sbjct: 112 tctgccaaaggagatttgcccggcaattcctctgca 147
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 92 tgtgctctctgccaatggagatttgcccagcaattc 127
||||| ||||||||| |||||||||||| |||||||
Sbjct: 86 tgtgccctctgccaaaggagatttgcccggcaattc 121
Score = 40.1 bits (20), Expect = 4e-04
Identities = 36/40 (90%), Gaps = 1/40 (2%)
Strand = Plus / Plus
Query: 14 tgcattacagggcaa-atcttcactggcaggcagccactt 52
||||||||||||||| || | || ||||||||||||||||
Sbjct: 14 tgcattacagggcaagatttccattggcaggcagccactt 53
>40387_rco-MIR399e:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 99 tctgccaatggagatttgcccagcaatt 126
|||||||| |||||||||||||||||||
Sbjct: 81 tctgccaaaggagatttgcccagcaatt 108
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 100 ctgccaatggagatttgcccagcaatt 126
||||||| |||||||||||||||||||
Sbjct: 78 ctgccaaaggagatttgcccagcaatt 104
>40095_ath-MIR399d:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 97 tctctgccaatggagatttgcccagcaattc 127
|||||||||| |||||||||||| |||||||
Sbjct: 66 tctctgccaaaggagatttgccccgcaattc 96
>39887_aly-MIR399d:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 97 tctctgccaatggagatttgcccagcaattc 127
|||||||||| |||||||||||| |||||||
Sbjct: 80 tctctgccaaaggagatttgccccgcaattc 110
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 100 ctgccaatggagatttgcccagcaat 125
||||||| ||||||||||||||||||
Sbjct: 86 ctgccaaaggagatttgcccagcaat 111
>42045_osa-MIR399e:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 100 ctgccaatggagatttgcccagcaat 125
||||||| ||||||||||||||||||
Sbjct: 87 ctgccaaaggagatttgcccagcaat 112
>41061_ghr-MIR399b:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 17 attacagggcaaa-tcttcactggcaggcagcca 49
||||||||||||| |||||| |||||||||||||
Sbjct: 7 attacagggcaaaatcttcagtggcaggcagcca 40
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 99 tctgccaatggagatttgcccagcaattccactgcaac 136
|||||||| ||||||||||||||| |||| |||||||
Sbjct: 93 tctgccaaaggagatttgcccagcgattctcctgcaac 130
>42047_osa-MIR399g:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 99 tctgccaatggagatttgcccagcaattc 127
|||||||| ||||||||||||||| ||||
Sbjct: 87 tctgccaaaggagatttgcccagcgattc 115
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 tgcagttgcattacagggcaa 28
|||||||||||||||||||||
Sbjct: 3 tgcagttgcattacagggcaa 23
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 8 tgcagttgcattacagggcaa 28
|||||||||||||||||||||
Sbjct: 3 tgcagttgcattacagggcaa 23
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 95 gctctctgccaatggagatttgcccagcaattc 127
|||| ||||||| |||||||||||| |||||||
Sbjct: 85 gctcgctgccaaaggagatttgccccgcaattc 117
>41153_tcc-MIR399h:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 95 gctctctgccaatggagatttgcccagcaattc 127
|||| ||||||| |||||||||||| |||||||
Sbjct: 71 gctcactgccaaaggagatttgccccgcaattc 103
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 99 tctgccaatggagatttgcccagcaattc 127
|||||||| ||||||||||||||| ||||
Sbjct: 93 tctgccaaaggagatttgcccagcgattc 121
>40097_ath-MIR399f:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 95 gctctctgccaatggagatttgccc 119
|||||||||||| ||||||||||||
Sbjct: 82 gctctctgccaaaggagatttgccc 106
>39889_aly-MIR399f:mirbase
Length = 167
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 95 gctctctgccaatggagatttgccc 119
|||||||||||| ||||||||||||
Sbjct: 106 gctctctgccaaaggagatttgccc 130
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 100 ctgccaatggagatttgcccagcaattc 127
|||||||||||| ||||||||||||||
Sbjct: 30 ctgccaatggagtattgcccagcaattc 3
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 99 tctgccaatggagatttgcccagc 122
|||||||| |||||||||||||||
Sbjct: 77 tctgccaaaggagatttgcccagc 100
>39892_aly-MIR399i:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 100 ctgccaatggagatttgcccagcaattc 127
||||||| |||||||||||| |||||||
Sbjct: 91 ctgccaaaggagatttgccccgcaattc 118
