miRNEST 2.0, an integrative microRNA resource :: BLAST
>41674_vvi-MIR399g:mirbase
Length = 113
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 68 taagctcactgccaaaggagatttgccccgcaattcagc 106
||||||||||||||||||||||||||||| |||||||||
Sbjct: 74 taagctcactgccaaaggagatttgcccctcaattcagc 112
>41448_ptc-MIR399a:mirbase
Length = 120
Score = 65.9 bits (33), Expect = 6e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 68 taagctcactgccaaaggagatttgccccgcaattca 104
||||||| |||||||||||||||||||||||||||||
Sbjct: 82 taagctcgctgccaaaggagatttgccccgcaattca 118
>39887_aly-MIR399d:mirbase
Length = 135
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaattcagccatgctaaac 116
||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 83 ctgccaaaggagatttgccccgcaattcatccatgcaaaac 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 6 tgcatggatgcattacagggcaaatctcctttgg 39
|||||||||| ||| | |||||||||||||||||
Sbjct: 119 tgcatggatgaattgcggggcaaatctcctttgg 86
>41452_ptc-MIR399e:mirbase
Length = 114
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 71 gctcactgccaaaggagatttgccccgcaattca 104
|||||||||||||| |||||||||||||||||||
Sbjct: 79 gctcactgccaaagaagatttgccccgcaattca 112
>39892_aly-MIR399i:mirbase
Length = 127
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 75 actgccaaaggagatttgccccgcaattca 104
||||||||||||||||||||||||||||||
Sbjct: 90 actgccaaaggagatttgccccgcaattca 119
>41451_ptc-MIR399d:mirbase
Length = 114
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 71 gctcactgccaaaggagatttgccccgcaattc 103
|||||||||||||| ||||||||||||||||||
Sbjct: 79 gctcactgccaaagaagatttgccccgcaattc 111
>40095_ath-MIR399d:mirbase
Length = 100
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaattca 104
|||||||||||||||||||||||||||||
Sbjct: 69 ctgccaaaggagatttgccccgcaattca 97
>39890_aly-MIR399g:mirbase
Length = 157
Score = 56.0 bits (28), Expect = 6e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 75 actgccaaaggagatttgccccgcaatt 102
||||||||||||||||||||||||||||
Sbjct: 109 actgccaaaggagatttgccccgcaatt 136
>42593_sbi-MIR399e:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 74 cactgccaaaggagatttgccccgcaat 101
|||||||||||||||||||||| |||||
Sbjct: 84 cactgccaaaggagatttgcccagcaat 111
>41672_vvi-MIR399e:mirbase
Length = 112
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaattc 103
|||||||||||||||||||| |||||||
Sbjct: 81 ctgccaaaggagatttgcccggcaattc 108
>41246_csi-MIR399a:mirbase
Length = 155
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaattc 103
|||||||||||||||||||| |||||||
Sbjct: 113 ctgccaaaggagatttgcccggcaattc 140
>41149_tcc-MIR399d:mirbase
Length = 136
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaattc 103
|||||||||||||||||||| |||||||
Sbjct: 95 ctgccaaaggagatttgcccggcaattc 122
>41147_tcc-MIR399b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaattc 103
|||||||||||||||||||| |||||||
Sbjct: 94 ctgccaaaggagatttgcccggcaattc 121
>41450_ptc-MIR399c:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 77 tgccaaaggagatttgccccgcaattc 103
||||||||||||||||||| |||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattc 123
>41449_ptc-MIR399b:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 77 tgccaaaggagatttgccccgcaattc 103
||||||||||||||||||| |||||||
Sbjct: 97 tgccaaaggagatttgcccggcaattc 123
>40740_mtr-MIR399j:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 72 ctcactgccaaaggagatttgccccgcaatt 102
||||| ||||||| |||||||||||||||||
Sbjct: 61 ctcaccgccaaagaagatttgccccgcaatt 91
>40737_mtr-MIR399g:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaatt 102
|||||||||||||||||||| ||||||
Sbjct: 78 ctgccaaaggagatttgcccagcaatt 104
>40387_rco-MIR399e:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaatt 102
|||||||||||||||||||| ||||||
Sbjct: 82 ctgccaaaggagatttgcccagcaatt 108
>40092_ath-MIR399a:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 17 attacagggcaaatctcctttgg 39
|||||||||||||||||||||||
Sbjct: 117 attacagggcaaatctcctttgg 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccc 95
||||||||||||||||||||
Sbjct: 92 ctgccaaaggagatttgccc 111
>39889_aly-MIR399f:mirbase
Length = 167
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 17 attacagggcaaatctcctttgg 39
|||||||||||||||||||||||
Sbjct: 136 attacagggcaaatctcctttgg 114
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 70 agctcactgccaaaggagatttgccc 95
||||| ||||||||||||||||||||
Sbjct: 105 agctctctgccaaaggagatttgccc 130
>42595_sbi-MIR399g:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 actgccaaaggagatttgccccgcaattca 104
|||||||||||| |||||||||| ||||||
Sbjct: 84 actgccaaaggaaatttgccccggaattca 113
>42594_sbi-MIR399f:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaat 101
|||||||||||||||||||| |||||
Sbjct: 80 ctgccaaaggagatttgcccagcaat 105
>42051_osa-MIR399k:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 75 actgccaaaggagatttgccccgcaattca 104
|||||||||||| |||||||||| ||||||
Sbjct: 74 actgccaaaggaaatttgccccggaattca 103
>42046_osa-MIR399f:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaat 101
|||||||||||||||||||| |||||
Sbjct: 86 ctgccaaaggagatttgcccagcaat 111
>42045_osa-MIR399e:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaat 101
|||||||||||||||||||| |||||
Sbjct: 87 ctgccaaaggagatttgcccagcaat 112
>40384_rco-MIR399b:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaat 101
|||||||||||||||||||| |||||
Sbjct: 80 ctgccaaaggagatttgcccggcaat 105
>40097_ath-MIR399f:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 70 agctcactgccaaaggagatttgccc 95
||||| ||||||||||||||||||||
Sbjct: 81 agctctctgccaaaggagatttgccc 106
>40096_ath-MIR399e:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaat 101
||||||||||||||||||| ||||||
Sbjct: 78 ctgccaaaggagatttgcctcgcaat 103
>39888_aly-MIR399e:mirbase
Length = 191
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaat 101
||||||||||||||||||| ||||||
Sbjct: 117 ctgccaaaggagatttgcctcgcaat 142
>42824_zma-MIR399f:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaattca 104
||||||||||| |||||||||| ||||||
Sbjct: 65 ctgccaaaggaaatttgccccggaattca 93
>42047_osa-MIR399g:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 9e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccccgcaattca 104
|||||||||||||||||||| || |||||
Sbjct: 88 ctgccaaaggagatttgcccagcgattca 116
>41892_hvu-MIR399:mirbase
Length = 131
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 77 tgccaaaggagatttgccccg 97
|||||||||||||||||||||
Sbjct: 102 tgccaaaggagatttgccccg 122
>41148_tcc-MIR399c:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 9e-05
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 71 gctcactgccaaaggagatttgccccgcaattc 103
|||| ||||||| |||||||||||| |||||||
Sbjct: 95 gctctctgccaatggagatttgcccagcaattc 127
>42048_osa-MIR399h:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 74 cactgccaaaggagatttgccccgcaat 101
||||||||||||||| |||||| |||||
Sbjct: 66 cactgccaaaggagacttgcccagcaat 93
>41063_ghr-MIR399d:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 77 tgccaaaggagatttgccccgcaattca 104
||||||||||||||||||| || |||||
Sbjct: 67 tgccaaaggagatttgccctgccattca 94
>40736_mtr-MIR399f:mirbase
Length = 104
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccc 95
||||||||||||||||||||
Sbjct: 78 ctgccaaaggagatttgccc 97
>40735_mtr-MIR399e:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccc 95
||||||||||||||||||||
Sbjct: 94 ctgccaaaggagatttgccc 113
>40731_mtr-MIR399a:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccc 95
||||||||||||||||||||
Sbjct: 94 ctgccaaaggagatttgccc 113
>40299_bna-MIR399:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccc 95
||||||||||||||||||||
Sbjct: 80 ctgccaaaggagatttgccc 99
>39884_aly-MIR399a:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 76 ctgccaaaggagatttgccc 95
||||||||||||||||||||
Sbjct: 112 ctgccaaaggagatttgccc 131
