miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>41509_ptc-MIR530a:mirbase
          Length = 144

 Score = 60.0 bits (30), Expect = 6e-10
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                            
Query: 7  atgtagcctttatctgcatttgcacctgcacctt 40
          |||| |||||||||||||||||||||||||||||
Sbjct: 7  atgttgcctttatctgcatttgcacctgcacctt 40



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 137 gaggtgcaggggcagctgcaggtgaatgccattttgg 173
           |||||||||| |||| |||||||||||||||| ||||
Sbjct: 107 gaggtgcaggtgcaggtgcaggtgaatgccatgttgg 143




>41510_ptc-MIR530b:mirbase
          Length = 172

 Score = 52.0 bits (26), Expect = 1e-07
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                        
Query: 7  atgtagcctttatctgcatttgcacctgca 36
          |||| |||||||||||||||||||||||||
Sbjct: 7  atgttgcctttatctgcatttgcacctgca 36



 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 137 gaggtgcaggggcagctgcaggtgaatgccattttgg 173
           |||||||||| |||  |||||||||||||||||||||
Sbjct: 135 gaggtgcaggtgcaagtgcaggtgaatgccattttgg 171




>41157_tcc-MIR530a:mirbase
          Length = 163

 Score = 50.1 bits (25), Expect = 6e-07
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                   
Query: 15 tttatctgcatttgcacctgcacct 39
          |||||||||||||||||||||||||
Sbjct: 15 tttatctgcatttgcacctgcacct 39




>41263_csi-MIR530b:mirbase
          Length = 154

 Score = 48.1 bits (24), Expect = 2e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 13 cctttatctgcatttgcacctgca 36
          ||||||||||||||||||||||||
Sbjct: 3  cctttatctgcatttgcacctgca 26




>41262_csi-MIR530a:mirbase
          Length = 129

 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                
Query: 19 tctgcatttgcacctgcacctt 40
          ||||||||||||||||||||||
Sbjct: 14 tctgcatttgcacctgcacctt 35




>42106_osa-MIR530:mirbase
          Length = 157

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 20 ctgcatttgcacctgcacct 39
          ||||||||||||||||||||
Sbjct: 10 ctgcatttgcacctgcacct 29




>42105_osa-MIR530:mirbase
          Length = 157

 Score = 40.1 bits (20), Expect = 6e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 20 ctgcatttgcacctgcacct 39
          ||||||||||||||||||||
Sbjct: 10 ctgcatttgcacctgcacct 29