miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>41277_ctr-MIR156:mirbase
Length = 190
Score = 204 bits (103), Expect = 9e-54
Identities = 103/103 (100%)
Strand = Plus / Plus
Query: 1 cgagagagctactgacagaagagagtgagcacacgcaggtaattgtattagaaaatatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 cgagagagctactgacagaagagagtgagcacacgcaggtaattgtattagaaaatatct 82
Query: 61 ttgcaggtgcgtgctcgctcctcttctgtcagcgtcatttttg 103
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 ttgcaggtgcgtgctcgctcctcttctgtcagcgtcatttttg 125
>41082_tcc-MIR156c:mirbase
Length = 121
Score = 75.8 bits (38), Expect = 6e-15
Identities = 74/85 (87%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacacgcaggtaattgtattagaa--aatatctttgcaggt 68
||||||||||||||||||||||||||||| |||||||| | || || |||||| |||
Sbjct: 19 actgacagaagagagtgagcacacgcaggcaattgtatgaaaagccatgcctttgcgggt 78
Query: 69 gcgtgctcgctcctcttctgtcagc 93
|||||||| || |||||||||||||
Sbjct: 79 gcgtgctcacttctcttctgtcagc 103
>40333_rco-MIR156d:mirbase
Length = 93
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacacgcaggtaattgtat 48
||||||||||||||||||||||||||||| ||||||||
Sbjct: 4 actgacagaagagagtgagcacacgcaggcaattgtat 41
>41045_ghr-MIR156d:mirbase
Length = 96
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacgcagg 39
|||||||||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacacgcagg 35
>41564_vvi-MIR156d:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 8e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacacgcaggtaatt 44
||||||||||||||||||||||| ||||| ||||
Sbjct: 9 actgacagaagagagtgagcacatgcaggcaatt 42
>41562_vvi-MIR156b:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacacgcaggtaattgtat 48
|||||||||||||||||||||||| ||| ||||||||
Sbjct: 9 actgacagaagagagtgagcacacagaggcaattgtat 46
>40003_ath-MIR156b:mirbase
Length = 183
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacacgcagg 39
||||||||||||||||||||||| |||||
Sbjct: 45 actgacagaagagagtgagcacatgcagg 73
>39791_aly-MIR156b:mirbase
Length = 109
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacacgcagg 39
||||||||||||||||||||||| |||||
Sbjct: 11 actgacagaagagagtgagcacatgcagg 39
>42678_zma-MIR156a:mirbase
Length = 152
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacac 34
||||||||||||||||||||||||
Sbjct: 16 actgacagaagagagtgagcacac 39
>42493_sbi-MIR156i:mirbase
Length = 121
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacac 34
||||||||||||||||||||||||
Sbjct: 1 actgacagaagagagtgagcacac 24
>41293_ptc-MIR156f:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacac 34
||||||||||||||||||||||||
Sbjct: 9 actgacagaagagagtgagcacac 32
>41290_ptc-MIR156c:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacac 34
||||||||||||||||||||||||
Sbjct: 9 actgacagaagagagtgagcacac 32
>41288_ptc-MIR156a:mirbase
Length = 101
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacac 34
||||||||||||||||||||||||
Sbjct: 9 actgacagaagagagtgagcacac 32
>40004_ath-MIR156c:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacac 34
||||||||||||||||||||||||
Sbjct: 10 actgacagaagagagtgagcacac 33
>40002_ath-MIR156a:mirbase
Length = 123
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacac 34
||||||||||||||||||||||||
Sbjct: 19 actgacagaagagagtgagcacac 42
>39792_aly-MIR156c:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacac 34
||||||||||||||||||||||||
Sbjct: 9 actgacagaagagagtgagcacac 32
>39790_aly-MIR156a:mirbase
Length = 184
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 11 actgacagaagagagtgagcacac 34
||||||||||||||||||||||||
Sbjct: 47 actgacagaagagagtgagcacac 70
>42689_zma-MIR156l:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacg 24
>42686_zma-MIR156i:mirbase
Length = 117
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 13 tgacagaagagagtgagcacacg 35
>42685_zma-MIR156h:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacg 42
>42682_zma-MIR156e:mirbase
Length = 126
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacg 42
>42681_zma-MIR156d:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 16 tgacagaagagagtgagcacacg 38
>42680_zma-MIR156c:mirbase
Length = 139
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctgacagaagagagtgagcacac 34
|||||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagcacac 42
>42633_tae-MIR156:mirbase
Length = 278
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctgacagaagagagtgagcacac 34
|||||||||||||||||||||||
Sbjct: 95 ctgacagaagagagtgagcacac 117
>42492_sbi-MIR156h:mirbase
Length = 94
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacg 24
>42491_sbi-MIR156g:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 2 tgacagaagagagtgagcacacg 24
>42485_sbi-MIR156a:mirbase
Length = 84
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacacg 23
>42467_ssp-MIR156:mirbase
Length = 543
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctgacagaagagagtgagcacac 34
|||||||||||||||||||||||
Sbjct: 4 ctgacagaagagagtgagcacac 26
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 304 tgacagaagagagtgagcacac 325
>42451_sof-MIR156:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctgacagaagagagtgagcacac 34
|||||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagcacac 42
>41913_osa-MIR156j:mirbase
Length = 165
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 42 tgacagaagagagtgagcacacg 64
>41912_osa-MIR156i:mirbase
Length = 90
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacacg 25
>41911_osa-MIR156h:mirbase
Length = 101
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacacg 31
>41910_osa-MIR156g:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctgacagaagagagtgagcacac 34
|||||||||||||||||||||||
Sbjct: 3 ctgacagaagagagtgagcacac 25
>41908_osa-MIR156e:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 10 tgacagaagagagtgagcacacg 32
>41907_osa-MIR156d:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 20 tgacagaagagagtgagcacacg 42
>41906_osa-MIR156c:mirbase
Length = 149
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctgacagaagagagtgagcacac 34
|||||||||||||||||||||||
Sbjct: 28 ctgacagaagagagtgagcacac 50
>41905_osa-MIR156b:mirbase
Length = 176
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 ctgacagaagagagtgagcacac 34
|||||||||||||||||||||||
Sbjct: 42 ctgacagaagagagtgagcacac 64
>41904_osa-MIR156a:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacacg 29
>41729_bdi-MIR156d:mirbase
Length = 151
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 31 tgacagaagagagtgagcacacg 53
>41728_bdi-MIR156c:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacacg 35
|||||||||||||||||||||||
Sbjct: 32 tgacagaagagagtgagcacacg 54
>42679_zma-MIR156b:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>42487_sbi-MIR156c:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>42486_sbi-MIR156b:mirbase
Length = 84
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>41909_osa-MIR156f:mirbase
Length = 186
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 4 tgacagaagagagtgagcacac 25
>41881_hvu-MIR156:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>41727_bdi-MIR156b:mirbase
Length = 205
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 31 tgacagaagagagtgagcacac 52
>41563_vvi-MIR156c:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>41292_ptc-MIR156e:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>41291_ptc-MIR156d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>41289_ptc-MIR156b:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 11 tgacagaagagagtgagcacac 32
>41086_tcc-MIR156g:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>41083_tcc-MIR156d:mirbase
Length = 125
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>41081_tcc-MIR156b:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>41043_ghr-MIR156b:mirbase
Length = 113
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 3 tgacagaagagagtgagcacac 24
>41042_ghr-MIR156a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 9 tgacagaagagagtgagcacac 30
>40650_mtr-MIR156c:mirbase
Length = 98
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacac 27
>40649_mtr-MIR156b:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacac 27
>40425_gma-MIR156a:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 12 ctgacagaagagagtgagcaca 33
||||||||||||||||||||||
Sbjct: 20 ctgacagaagagagtgagcaca 41
>40332_rco-MIR156c:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacac 27
>40331_rco-MIR156b:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacac 27
>40330_rco-MIR156a:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 6 tgacagaagagagtgagcacac 27
>40258_bna-MIR156a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 1 tgacagaagagagtgagcacac 22
>40007_ath-MIR156f:mirbase
Length = 132
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 21 tgacagaagagagtgagcacac 42
>40006_ath-MIR156e:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 7 tgacagaagagagtgagcacac 28
>40005_ath-MIR156d:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 18 tgacagaagagagtgagcacac 39
>39795_aly-MIR156f:mirbase
Length = 228
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 68 tgacagaagagagtgagcacac 89
>39794_aly-MIR156e:mirbase
Length = 150
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 26 tgacagaagagagtgagcacac 47
>39793_aly-MIR156d:mirbase
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 13 tgacagaagagagtgagcacac 34
||||||||||||||||||||||
Sbjct: 17 tgacagaagagagtgagcacac 38
>39726_smo-MIR156a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 14 gacagaagagagtgagcacacg 35
||||||||||||||||||||||
Sbjct: 12 gacagaagagagtgagcacacg 33
