miRNEST 2.0, an integrative microRNA resource :: BLAST
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 63.9 bits (32), Expect = 3e-11
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 2 ctgtttgcagttggagcaccatcaagattcacaaac--tattagggttagtgagtggaga 59
|||||||| | ||||||||||||||||||||||||| |||||||| || | ||||| ||
Sbjct: 1 ctgtttgccgatggagcaccatcaagattcacaaactttattagggctaataagtggtga 60
Query: 60 taatggtggct 70
| |||||||||
Sbjct: 61 tgatggtggct 71
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagc 141
||||||||||||||||||||||
Sbjct: 114 ggaatcttgatgatgctgcagc 135
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagcagcgataagtggctaaat 159
|||||||||||||||||||||| || |||| |||||||||
Sbjct: 115 ggaatcttgatgatgctgcagcggcaataaatggctaaat 154
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 actgtttgcagttggagcaccatcaagattcacaaa 36
||||||||| | ||||||| ||||||||||||||||
Sbjct: 7 actgtttgctgatggagcatcatcaagattcacaaa 42
>41050_ghr-MIR172:mirbase
Length = 125
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 1 actgtttgcagttggagcaccatcaagattcacaa 35
||||||||| ||||||||| |||||||||||||||
Sbjct: 5 actgtttgctgttggagcatcatcaagattcacaa 39
>40462_gma-MIR172e:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagcagcgataa 149
||||||||||||||||||||||||| ||||
Sbjct: 114 ggaatcttgatgatgctgcagcagcaataa 143
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 actgtttgcagttggagcaccatcaagattcacaa 35
||||||||| | ||||||| |||||||||||||||
Sbjct: 10 actgtttgccggtggagcatcatcaagattcacaa 44
>40461_gma-MIR172d:mirbase
Length = 150
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagcagcgataa 149
||||||||||||||||||||||||| ||||
Sbjct: 111 ggaatcttgatgatgctgcagcagcaataa 140
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 6 ttgcagttggagcaccatcaagattcacaa 35
|||||| ||||||| |||||||||||||||
Sbjct: 15 ttgcagatggagcatcatcaagattcacaa 44
>40460_gma-MIR172c:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagcagcgataa 149
||||||||||||||||||||||||| ||||
Sbjct: 114 ggaatcttgatgatgctgcagcagcaataa 143
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 actgtttgcagttggagcaccatcaagattcacaa 35
||||||||| | ||||||| |||||||||||||||
Sbjct: 10 actgtttgccggtggagcatcatcaagattcacaa 44
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 50.1 bits (25), Expect = 5e-07
Identities = 52/60 (86%), Gaps = 2/60 (3%)
Strand = Plus / Plus
Query: 13 tggagcaccatcaagattcacaaac--tattagggttagtgagtggagataatggtggct 70
||||||| ||||||||||||||| | |||||||| ||||| |||| ||| |||||||||
Sbjct: 12 tggagcatcatcaagattcacaagctttattagggctagtgtgtggtgatgatggtggct 71
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagc 141
||||||||||||||||||||||
Sbjct: 114 ggaatcttgatgatgctgcagc 135
>40065_ath-MIR172c:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 actgtttgcagttggagcaccatcaagattcacaaa 36
|||||| || ||||||||| ||||||||||||||||
Sbjct: 5 actgttcgctgttggagcatcatcaagattcacaaa 40
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagcgataagtggct 155
||||||||||||||||||||| || || |||||||
Sbjct: 99 gaatcttgatgatgctgcagctgcaatcagtggct 133
>39854_aly-MIR172c:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 1 actgtttgcagttggagcaccatcaagattcacaaa 36
|||||| || ||||||||| ||||||||||||||||
Sbjct: 5 actgttcgctgttggagcatcatcaagattcacaaa 40
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagcgataagtggct 155
||||||||||||||||||||| || || |||||||
Sbjct: 99 gaatcttgatgatgctgcagctgcaatcagtggct 133
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagc 141
||||||||||||||||||||||
Sbjct: 108 ggaatcttgatgatgctgcagc 129
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 4 gtttgcagttggagcaccatcaagattcacaa 35
|||||| | ||||||| |||||||||||||||
Sbjct: 1 gtttgcggatggagcatcatcaagattcacaa 32
>40366_rco-MIR172:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 13 tggagcaccatcaagattcacaaact 38
||||||| ||||||||||||||||||
Sbjct: 5 tggagcatcatcaagattcacaaact 30
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagc 141
||||||||||||||||||||||
Sbjct: 119 ggaatcttgatgatgctgcagc 140
>41993_osa-MIR172d:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 ttgcagttggagcaccatcaagattcaca 34
|||||| || |||||||||||||||||||
Sbjct: 14 ttgcaggtgcagcaccatcaagattcaca 42
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagc 144
||||||||||||||||||| ||||
Sbjct: 92 gaatcttgatgatgctgcatcagc 115
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagcgataa 149
||||||||||||||||||| |||| ||||
Sbjct: 100 gaatcttgatgatgctgcatcagccataa 128
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 tgtttgcagttggagcaccatcaagattcaca 34
||||||||| || |||| ||||||||||||||
Sbjct: 2 tgtttgcaggtgcagcatcatcaagattcaca 33
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagcgataa 149
||||||||||||||||||| |||| ||||
Sbjct: 101 gaatcttgatgatgctgcatcagccataa 129
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 tgtttgcagttggagcaccatcaagattcaca 34
||||||||| || |||| ||||||||||||||
Sbjct: 2 tgtttgcaggtgcagcatcatcaagattcaca 33
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagcagc 144
|||||||||||||||||||| ||||
Sbjct: 123 ggaatcttgatgatgctgcatcagc 147
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 3 tgtttgcagttggagcaccatcaagattcacaaact 38
||||||||| || ||| ||||||||||||||||||
Sbjct: 12 tgtttgcagatgcggcatcatcaagattcacaaact 47
>40459_gma-MIR172b:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagcgataa 149
||||||||||||||||||| |||| ||||
Sbjct: 115 gaatcttgatgatgctgcatcagccataa 143
>40458_gma-MIR172a:mirbase
Length = 159
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagcgataa 149
||||||||||||||||||| |||| ||||
Sbjct: 121 gaatcttgatgatgctgcatcagccataa 149
>40067_ath-MIR172e:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagcagc 144
|||||||||||||||||||| ||||
Sbjct: 95 ggaatcttgatgatgctgcatcagc 119
>40066_ath-MIR172d:mirbase
Length = 124
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagc 141
|||||||||||||||||||||
Sbjct: 89 gaatcttgatgatgctgcagc 109
>39856_aly-MIR172e:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgcagcagc 144
|||||||||||||||||||| ||||
Sbjct: 98 ggaatcttgatgatgctgcatcagc 122
>39855_aly-MIR172d:mirbase
Length = 163
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagc 141
|||||||||||||||||||||
Sbjct: 113 gaatcttgatgatgctgcagc 133
>42779_zma-MIR172e:mirbase
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgca 139
||||||||||||||||||||
Sbjct: 135 ggaatcttgatgatgctgca 154
>42561_sbi-MIR172e:mirbase
Length = 115
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagc 144
||||||||||||||||||| ||||
Sbjct: 77 gaatcttgatgatgctgcaccagc 100
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgca 139
||||||||||||||||||||
Sbjct: 150 ggaatcttgatgatgctgca 169
>41992_osa-MIR172c:mirbase
Length = 111
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagc 144
||||||||||||||||||| ||||
Sbjct: 82 gaatcttgatgatgctgcaccagc 105
>41991_osa-MIR172b:mirbase
Length = 238
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgca 139
||||||||||||||||||||
Sbjct: 208 ggaatcttgatgatgctgca 227
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgca 139
||||||||||||||||||||
Sbjct: 204 ggaatcttgatgatgctgca 223
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 121 gaatcttgatgatgctgcagcagc 144
||||||||||||||||||| ||||
Sbjct: 28 gaatcttgatgatgctgcatcagc 5
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 3 tgtttgcagttggagcaccatcaagattcaca 34
||||||||| || |||| ||||||||||||||
Sbjct: 117 tgtttgcaggtgtagcatcatcaagattcaca 86
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgca 139
||||||||||||||||||||
Sbjct: 104 ggaatcttgatgatgctgca 123
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgca 139
||||||||||||||||||||
Sbjct: 153 ggaatcttgatgatgctgca 172
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 tgtttgcagttggagcaccatcaagattcaca 34
||||||| | ||||||| ||||||||||||||
Sbjct: 2 tgtttgcgggtggagcatcatcaagattcaca 33
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 ggaatcttgatgatgctgca 139
||||||||||||||||||||
Sbjct: 86 ggaatcttgatgatgctgca 105
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagc 144
||||||||||||||||||| ||||
Sbjct: 99 gaatcttgatgatgctgcatcagc 122
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 121 gaatcttgatgatgctgcagcagc 144
|||||||||| |||||||||||||
Sbjct: 38 gaatcttgataatgctgcagcagc 15
>40463_gma-MIR172f:mirbase
Length = 133
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 121 gaatcttgatgatgctgcagcagc 144
||||||||||||||||||| ||||
Sbjct: 110 gaatcttgatgatgctgcatcagc 133
>39853_aly-MIR172b:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 3 tgtttgcagttggagcaccatcaagattcaca 34
|||||| || || |||||||||||||||||||
Sbjct: 16 tgtttgtaggtgcagcaccatcaagattcaca 47
