miRNEST 2.0, an integrative microRNA resource :: BLAST
>42814_zma-MIR396h:mirbase
Length = 124
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 10 tctttgtgatcttccacagctttcttgaactg 41
||||||||||||||||||||||||||||||||
Sbjct: 109 tctttgtgatcttccacagctttcttgaactg 78
>42808_zma-MIR396b:mirbase
Length = 136
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 10 tctttgtgatcttccacagctttcttgaactg 41
||||||||||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactg 41
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 10 tctttgtgatcttccacagctttcttgaactg 41
||||||||||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactg 41
>42461_sof-MIR396:mirbase
Length = 134
Score = 63.9 bits (32), Expect = 3e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 10 tctttgtgatcttccacagctttcttgaactg 41
||||||||||||||||||||||||||||||||
Sbjct: 10 tctttgtgatcttccacagctttcttgaactg 41
>42026_osa-MIR396a:mirbase
Length = 154
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctttgtgatcttccacagctttcttgaactg 41
|||||||||||||||||||||||||||||||
Sbjct: 1 ctttgtgatcttccacagctttcttgaactg 31
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 4 aggtcctctttgtgatcttccacagctttcttgaactgt 42
|||| ||||||||||| ||||||||||||||||||||||
Sbjct: 4 aggttctctttgtgattttccacagctttcttgaactgt 42
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 84 acacaattcaagaaagctgtggaaaa 109
||||| ||||||||||||||||||||
Sbjct: 44 acacagttcaagaaagctgtggaaaa 19
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 83 aacacaattcaagaaagctgtggaaaactactaagaggat 122
|||||| |||| || |||||||||||| |||| |||||||
Sbjct: 100 aacacagttcatgagagctgtggaaaattactgagaggat 139
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 8 cctctttgtgatcttccacagctttcttgaactg 41
||||| ||||||||||||||||||||||||||||
Sbjct: 20 cctctctgtgatcttccacagctttcttgaactg 53
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 14 tgtgatcttccacagctttcttgaactgt 42
|||||||||||||||||||||||||||||
Sbjct: 4 tgtgatcttccacagctttcttgaactgt 32
>40646_lja-MIR396:mirbase
Length = 108
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 6 gtcctctttgtgatcttccacagctttcttgaactg 41
||||||||||| |||||||||||||||||||||||
Sbjct: 1 gtcctctttgtattcttccacagctttcttgaactg 36
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaactactaagagga 121
|||||||||||||||||| | ||| |||||||
Sbjct: 33 ttcaagaaagctgtggaagaatacaaagagga 2
>40477_gma-MIR396e:mirbase
Length = 114
Score = 56.0 bits (28), Expect = 8e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 15 gtgatcttccacagctttcttgaactgt 42
||||||||||||||||||||||||||||
Sbjct: 1 gtgatcttccacagctttcttgaactgt 28
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 82 caacacaattcaagaaagctgtggaa 107
||||||| ||||||||||||||||||
Sbjct: 32 caacacagttcaagaaagctgtggaa 7
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 85 cacaattcaagaaagctgtggaaaa 109
|||||||||||| ||||||||||||
Sbjct: 86 cacaattcaagatagctgtggaaaa 110
>42027_osa-MIR396b:mirbase
Length = 116
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 11 ctttgtgatcttccacagctttcttgaactg 41
||||||| |||||||||||||||||||||||
Sbjct: 1 ctttgtggtcttccacagctttcttgaactg 31
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 8 cctctttgtgatcttccacagctttcttgaactg 41
|||||||| ||||||||||||||||||||||||
Sbjct: 20 cctctttgctatcttccacagctttcttgaactg 53
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 8 cctctttgtgatcttccacagctttcttgaactg 41
||||||||| |||||||||||||||||||||||
Sbjct: 8 cctctttgtattcttccacagctttcttgaactg 41
>41242_csi-MIR396b:mirbase
Length = 134
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaactactaagaggat 122
|||||||||||||||||||| ||| ||||||||
Sbjct: 37 ttcaagaaagctgtggaaaaatacaaagaggat 5
Score = 46.1 bits (23), Expect = 8e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 7 tcctctttgtgatcttccacagctttcttgaactg 41
|||||||||| | |||||||||||||||||||||
Sbjct: 6 tcctctttgtatttttccacagctttcttgaactg 40
>40473_gma-MIR396a:mirbase
Length = 140
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 9 ctctttgtgatcttccacagctttcttgaactg 41
|||||||| |||||||||||||||||||||||
Sbjct: 9 ctctttgtattcttccacagctttcttgaactg 41
>42813_zma-MIR396g:mirbase
Length = 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 18 atcttccacagctttcttgaactg 41
||||||||||||||||||||||||
Sbjct: 114 atcttccacagctttcttgaactg 91
>42807_zma-MIR396a:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactg 41
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 19 tcttccacagctttcttgaactg 41
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 4 tcttccacagctttcttgaactg 26
>40085_ath-MIR396a:mirbase
Length = 151
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 9 tcttccacagctttcttgaactg 31
>39877_aly-MIR396a:mirbase
Length = 172
Score = 46.1 bits (23), Expect = 8e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaactg 41
|||||||||||||||||||||||
Sbjct: 22 tcttccacagctttcttgaactg 44
>39379_pab-MIR396a:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 tcttccacagctttcttgaact 40
||||||||||||||||||||||
Sbjct: 14 tcttccacagctttcttgaact 35
>42472_ssp-MIR396:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactg 41
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactg 21
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactg 41
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactg 21
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactgtctt 45
|||||||||||||||||||| ||||
Sbjct: 21 ttccacagctttcttgaactttctt 45
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 38 ttcaagaaagctgtggaaaa 19
>40296_bna-MIR396a:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactgtctt 45
|||||||||||||||||||| ||||
Sbjct: 1 ttccacagctttcttgaactttctt 25
>40086_ath-MIR396b:mirbase
Length = 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactgtctt 45
|||||||||||||||||||| ||||
Sbjct: 11 ttccacagctttcttgaactttctt 35
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 28 ttcaagaaagctgtggaaaa 9
>39878_aly-MIR396b:mirbase
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaactgtctt 45
|||||||||||||||||||| ||||
Sbjct: 32 ttccacagctttcttgaactttctt 56
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 49 ttcaagaaagctgtggaaaa 30
>42812_zma-MIR396f:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42811_zma-MIR396e:mirbase
Length = 166
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaact 21
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42028_osa-MIR396c:mirbase
Length = 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaact 51
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 31 ttcaagaaagctgtggaaaa 12
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 31 ttcaagaaagctgtggaaaa 12
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaact 33
>41440_ptc-MIR396f:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 15 gtgatcttccacagctttcttgaactgt 42
||||| |||||| |||||||||||||||
Sbjct: 5 gtgattttccacggctttcttgaactgt 32
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 28 ttcaagaaagctgtggaaaa 9
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 28 ttcaagaaagctgtggaaaa 9
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 28 ttcaagaaagctgtggaaaa 9
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41243_csi-MIR396c:mirbase
Length = 178
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 30 ttcaagaaagctgtggaaaa 11
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaact 32
>41212_ccl-MIR396:mirbase
Length = 277
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 160 ttcaagaaagctgtggaaaa 141
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 143 ttccacagctttcttgaact 162
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 23 ttcaagaaagctgtggaaaa 4
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40476_gma-MIR396d:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 28 ttcaagaaagctgtggaaaa 9
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40475_gma-MIR396c:mirbase
Length = 117
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 38 ttcaagaaagctgtggaaaa 19
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40474_gma-MIR396b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 38 ttcaagaaagctgtggaaaa 19
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40379_rco-MIR396:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 23 ttcaagaaagctgtggaaaa 4
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>39426_pta-MIR396:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 90 ttcaagaaagctgtggaaaa 109
||||||||||||||||||||
Sbjct: 34 ttcaagaaagctgtggaaaa 15
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 21 ttccacagctttcttgaact 40
||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaact 36
