miRNEST 2.0, an integrative microRNA resource :: BLAST
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 75.8 bits (38), Expect = 7e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 79 ttgttgcggttcaataaagctgtgggaagatacaaaca 116
||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ttgttgcggttcaataaagctgtgggaagatacaaaca 136
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 gtatttttccacagctttcttgaactgca 42
||||| |||||||||||||||||||||||
Sbjct: 5 gtattcttccacagctttcttgaactgca 33
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 73.8 bits (37), Expect = 3e-14
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 79 ttgttgcggttcaataaagctgtgggaagatacaaac 115
|||||||||||||||||||||||||||||||||||||
Sbjct: 99 ttgttgcggttcaataaagctgtgggaagatacaaac 135
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 gtatttttccacagctttcttgaactgca 42
||||| |||||||||||||||||||||||
Sbjct: 5 gtattcttccacagctttcttgaactgca 33
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 71.9 bits (36), Expect = 1e-13
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 78 tttgttgcggttcaataaagctgtgggaagatacaa 113
||||||||||||||||||||||||||||||||||||
Sbjct: 88 tttgttgcggttcaataaagctgtgggaagatacaa 123
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 14 gtatttttccacagctttcttgaactgca 42
||||| |||||||||||||||||||||||
Sbjct: 5 gtattcttccacagctttcttgaactgca 33
>40646_lja-MIR396:mirbase
Length = 108
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 6 tcctctttgtatttttccacagctttcttgaactgcat 43
||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 tcctctttgtattcttccacagctttcttgaactgcat 39
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 82 ttgcggttcaataaagctgtgggaagata 110
|||||||||||||||||||||||||||||
Sbjct: 71 ttgcggttcaataaagctgtgggaagata 99
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 81 gttgcggttcaataaagctgtgggaagatacaaacag 117
||||||||||||||||||||||||||||||| |||||
Sbjct: 84 gttgcggttcaataaagctgtgggaagataccaacag 120
Score = 60.0 bits (30), Expect = 4e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 10 ctttgtatttttccacagctttcttgaactgcat 43
||||||||| ||||||||||||||||||||||||
Sbjct: 1 ctttgtattcttccacagctttcttgaactgcat 34
>40473_gma-MIR396a:mirbase
Length = 140
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 8 ctctttgtatttttccacagctttcttgaactgcatc 44
||||||||||| |||||||||||||||||||||||||
Sbjct: 9 ctctttgtattcttccacagctttcttgaactgcatc 45
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 82 ttgcggttcaataaagctgtgggaagataca 112
|||||||||||||||||||||||||||||||
Sbjct: 98 ttgcggttcaataaagctgtgggaagataca 128
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 78 tttgttgcggttcaataaagctgtgggaagatacaa 113
|||| |||||||||||||||||||||||||||||||
Sbjct: 97 tttgctgcggttcaataaagctgtgggaagatacaa 132
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 10 ctttgtatttttccacagctttcttgaactgca 42
||||||||| |||||||||||||||||||||||
Sbjct: 1 ctttgtattcttccacagctttcttgaactgca 33
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 7 cctctttgtatttttccacagctttcttgaactgc 41
|||||||||||| ||||||||||||||||||||||
Sbjct: 8 cctctttgtattcttccacagctttcttgaactgc 42
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 79 ttgttgcggttcaataaagctgtgggaagatac 111
||||||| |||||||||||||||||||||||||
Sbjct: 105 ttgttgcagttcaataaagctgtgggaagatac 137
>40085_ath-MIR396a:mirbase
Length = 151
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 82 ttgcggttcaataaagctgtgggaagataca 112
|||||||||||||||||||||||||||||||
Sbjct: 118 ttgcggttcaataaagctgtgggaagataca 148
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 13 tgtatttttccacagctttcttgaactgca 42
|||||| |||||||||||||||||||||||
Sbjct: 4 tgtattcttccacagctttcttgaactgca 33
>39877_aly-MIR396a:mirbase
Length = 172
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 82 ttgcggttcaataaagctgtgggaagatac 111
||||||||||||||||||||||||||||||
Sbjct: 128 ttgcggttcaataaagctgtgggaagatac 157
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 7 cctctttgtatttttccacagctttcttgaactgca 42
||||| |||||| |||||||||||||||||||||||
Sbjct: 11 cctctctgtattcttccacagctttcttgaactgca 46
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 82 ttgcggttcaataaagctgtgggaagata 110
|||||||||||||||||||||||||||||
Sbjct: 67 ttgcggttcaataaagctgtgggaagata 95
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 15 tatttttccacagctttcttgaactgcatc 44
|||| |||||||||||||||||||||||||
Sbjct: 1 tattcttccacagctttcttgaactgcatc 30
>42813_zma-MIR396g:mirbase
Length = 114
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 20 ttccacagctttcttgaactgcatcat 46
|||||||||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaactgcatcat 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 20 gttcaataaagctgtgggaa 1
>42814_zma-MIR396h:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 20 ttccacagctttcttgaactgcatc 44
|||||||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaactgcatc 74
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 20 gttcaataaagctgtgggaa 1
>42808_zma-MIR396b:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgcatc 44
|||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatc 45
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 99 gttcaataaagctgtgggaa 118
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgcatc 44
|||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatc 45
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 91 gttcaataaagctgtgggaa 110
>42472_ssp-MIR396:mirbase
Length = 95
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgcatc 44
|||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcatc 25
>42461_sof-MIR396:mirbase
Length = 134
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgcatc 44
|||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcatc 45
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 97 gttcaataaagctgtgggaa 116
>42027_osa-MIR396b:mirbase
Length = 116
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgcatc 44
|||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgcatc 35
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 88 gttcaataaagctgtgggaa 107
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgcatc 44
|||||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgcatc 57
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 101 gttcaataaagctgtgggaa 120
>41241_csi-MIR396a:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 5 atcctctttgtatttttccacagctttcttgaa 37
|||||||| ||| ||||||||||||||||||||
Sbjct: 122 atcctcttagtagttttccacagctttcttgaa 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 6 tcctctttgtatttttccacagctttcttgaactg 40
|||||||||| | |||||||||||||||||||||
Sbjct: 7 tcctctttgtgatcttccacagctttcttgaactg 41
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 82 ttgcggttcaataaagctgtgggaa 106
|||||||||||||||||||||||||
Sbjct: 97 ttgcggttcaataaagctgtgggaa 121
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgcat 43
||||||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactgcat 24
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 50.1 bits (25), Expect = 4e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 8 ctctttgtatttttccacagctttcttgaactg 40
|||||||| |||||||||||||||||||||||
Sbjct: 9 ctctttgtgattttccacagctttcttgaactg 41
>39878_aly-MIR396b:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 15 tatttttccacagctttcttgaact 39
|||||||||||||||||||||||||
Sbjct: 27 tatttttccacagctttcttgaact 51
>42807_zma-MIR396a:mirbase
Length = 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgcat 43
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 100 gttcaataaagctgtgggaa 119
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgcat 43
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactgcat 44
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 88 gttcaataaagctgtgggaa 107
>42026_osa-MIR396a:mirbase
Length = 154
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgca 42
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactgca 33
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 126 gttcaataaagctgtgggaa 145
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tttttccacagctttcttgaact 39
|||||||||||||||||||||||
Sbjct: 8 tttttccacagctttcttgaact 30
>41243_csi-MIR396c:mirbase
Length = 178
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 tttttccacagctttcttgaact 39
|||||||||||||||||||||||
Sbjct: 10 tttttccacagctttcttgaact 32
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactgc 41
||||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaactgc 54
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 87 gttcaataaagctgtgggaa 106
||||||||||||||||||||
Sbjct: 102 gttcaataaagctgtgggaa 121
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 12 ttttccacagctttcttgaact 33
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 12 ttttccacagctttcttgaact 33
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaact 30
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaact 30
>41212_ccl-MIR396:mirbase
Length = 277
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 141 ttttccacagctttcttgaact 162
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 19 ttttccacagctttcttgaact 40
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 4 ttttccacagctttcttgaact 25
>40476_gma-MIR396d:mirbase
Length = 108
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaact 30
>40475_gma-MIR396c:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 19 ttttccacagctttcttgaact 40
>40474_gma-MIR396b:mirbase
Length = 126
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 19 ttttccacagctttcttgaact 40
>40379_rco-MIR396:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 4 ttttccacagctttcttgaact 25
>40086_ath-MIR396b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 9 ttttccacagctttcttgaact 30
>39426_pta-MIR396:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 18 ttttccacagctttcttgaact 39
||||||||||||||||||||||
Sbjct: 15 ttttccacagctttcttgaact 36
>42812_zma-MIR396f:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 tttccacagctttcttgaact 39
|||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaact 21
>42811_zma-MIR396e:mirbase
Length = 166
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 tttccacagctttcttgaact 39
|||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaact 21
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 tttccacagctttcttgaact 39
|||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaact 40
>42028_osa-MIR396c:mirbase
Length = 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 tttccacagctttcttgaact 39
|||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaact 30
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 19 tttccacagctttcttgaact 39
|||||||||||||||||||||
Sbjct: 31 tttccacagctttcttgaact 51
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactg 40
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactg 31
>40477_gma-MIR396e:mirbase
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 ttccacagctttcttgaactg 40
|||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaactg 27
>39381_pab-MIR396c:mirbase
Length = 143
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 15 tatttttccacagctttcttgaact 39
||||||||||| |||||||||||||
Sbjct: 20 tatttttccacggctttcttgaact 44
